Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1222 |
Symbol | |
ID | 6463375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1281532 |
End bp | 1282527 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642727470 |
Product | pentapeptide repeat protein |
Protein accession | YP_002018111 |
Protein GI | 194336317 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.154284 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAACCG TTGAACTGCT TCTCAGATCA GTAGAAAAAT GGAACGAAGC TCGTCAGGCA AATCCCGATG TTAAAATAGA TCTCCACGGG GCAGACCTCA GCGGAGCAAA CCTCAGTGAT GCAGACCTCA GCGGGGCAAA TCTGAACGGG ATTAACCTTT TTGGGGCAAA CCTAAGCGGG GTAAACCTTC TCGGTGCACA TCTCATTCAT GCAAACCTCA AAGGGGCAAA CCTAAGCGGA GCAAACCTCA GCGATGCGGA CCTCAATGGA GCAACACTCA GTTGGGCGGA TCTCAGAGGA GCAAACCTAA GCGGGGTATA TATTGCCTTT ACAGTTTTTG CTAATATAGA TCTCAGTTCT GTCATAGGAC TTGATACTGT TCAACATAGA GGCCCTTCAA CAATAGGCAT TGATACACTC TACAAGTCAA AAGGGAATAT CCCAGAGATA TTCTTGAAAG GCTGTGGATT ACCTGATACC TTCATTGAAT ATGCGCACTC CTTCACCAGC AAAGCTATTG AATTCTACTC TTGCTTTATC AGCCATAGTA CTGCGGATAA AGCGTTTGCA GATCGTCTCT ATGCTGATCT GCAAGCCAAA GGAGTACGGT GTTGGTACGC TCCGCATGAC ATGAAAGGAG GCAAAAAAAT ACATGTTCAA ATCGGTGAAG CCATACGACA ACATGAAAAG CTGCTGTTGA TCCTCTCCGA AAGCAGCATA AACAGTGAAT GGGTAAAACA GGAGATTACA AAGGCCAAAA AACGCGAGGA CAGAGAAGGA AAGCAAGTGC TTTTCCCCAT CAGTTTGATT GAGTTTGGCA AGATTCAAGA GTGGGAGTTC CCTGACAGCA AGGGCAGGGA TTTAGCAGAA GAGATCAGAT TGTACTACAT CCCGTCATTT GTCGGTTGGG AAAAAGATAA CGAAGCCTAT ACAAGAGAAT TCGGAAAGCT GTTGAACTCA TTCCAGGCAG AGAGGGATAT TGAAGGAAAA GCCTGA
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Protein sequence | MLTVELLLRS VEKWNEARQA NPDVKIDLHG ADLSGANLSD ADLSGANLNG INLFGANLSG VNLLGAHLIH ANLKGANLSG ANLSDADLNG ATLSWADLRG ANLSGVYIAF TVFANIDLSS VIGLDTVQHR GPSTIGIDTL YKSKGNIPEI FLKGCGLPDT FIEYAHSFTS KAIEFYSCFI SHSTADKAFA DRLYADLQAK GVRCWYAPHD MKGGKKIHVQ IGEAIRQHEK LLLILSESSI NSEWVKQEIT KAKKREDREG KQVLFPISLI EFGKIQEWEF PDSKGRDLAE EIRLYYIPSF VGWEKDNEAY TREFGKLLNS FQAERDIEGK A
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