Gene Ppha_1222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1222 
Symbol 
ID6463375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1281532 
End bp1282527 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content45% 
IMG OID642727470 
Productpentapeptide repeat protein 
Protein accessionYP_002018111 
Protein GI194336317 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.154284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAACCG TTGAACTGCT TCTCAGATCA GTAGAAAAAT GGAACGAAGC TCGTCAGGCA 
AATCCCGATG TTAAAATAGA TCTCCACGGG GCAGACCTCA GCGGAGCAAA CCTCAGTGAT
GCAGACCTCA GCGGGGCAAA TCTGAACGGG ATTAACCTTT TTGGGGCAAA CCTAAGCGGG
GTAAACCTTC TCGGTGCACA TCTCATTCAT GCAAACCTCA AAGGGGCAAA CCTAAGCGGA
GCAAACCTCA GCGATGCGGA CCTCAATGGA GCAACACTCA GTTGGGCGGA TCTCAGAGGA
GCAAACCTAA GCGGGGTATA TATTGCCTTT ACAGTTTTTG CTAATATAGA TCTCAGTTCT
GTCATAGGAC TTGATACTGT TCAACATAGA GGCCCTTCAA CAATAGGCAT TGATACACTC
TACAAGTCAA AAGGGAATAT CCCAGAGATA TTCTTGAAAG GCTGTGGATT ACCTGATACC
TTCATTGAAT ATGCGCACTC CTTCACCAGC AAAGCTATTG AATTCTACTC TTGCTTTATC
AGCCATAGTA CTGCGGATAA AGCGTTTGCA GATCGTCTCT ATGCTGATCT GCAAGCCAAA
GGAGTACGGT GTTGGTACGC TCCGCATGAC ATGAAAGGAG GCAAAAAAAT ACATGTTCAA
ATCGGTGAAG CCATACGACA ACATGAAAAG CTGCTGTTGA TCCTCTCCGA AAGCAGCATA
AACAGTGAAT GGGTAAAACA GGAGATTACA AAGGCCAAAA AACGCGAGGA CAGAGAAGGA
AAGCAAGTGC TTTTCCCCAT CAGTTTGATT GAGTTTGGCA AGATTCAAGA GTGGGAGTTC
CCTGACAGCA AGGGCAGGGA TTTAGCAGAA GAGATCAGAT TGTACTACAT CCCGTCATTT
GTCGGTTGGG AAAAAGATAA CGAAGCCTAT ACAAGAGAAT TCGGAAAGCT GTTGAACTCA
TTCCAGGCAG AGAGGGATAT TGAAGGAAAA GCCTGA
 
Protein sequence
MLTVELLLRS VEKWNEARQA NPDVKIDLHG ADLSGANLSD ADLSGANLNG INLFGANLSG 
VNLLGAHLIH ANLKGANLSG ANLSDADLNG ATLSWADLRG ANLSGVYIAF TVFANIDLSS
VIGLDTVQHR GPSTIGIDTL YKSKGNIPEI FLKGCGLPDT FIEYAHSFTS KAIEFYSCFI
SHSTADKAFA DRLYADLQAK GVRCWYAPHD MKGGKKIHVQ IGEAIRQHEK LLLILSESSI
NSEWVKQEIT KAKKREDREG KQVLFPISLI EFGKIQEWEF PDSKGRDLAE EIRLYYIPSF
VGWEKDNEAY TREFGKLLNS FQAERDIEGK A