| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1202 |
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| Symbol | |
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| ID | 6463577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1254857 |
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| End bp | 1258237 |
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| Gene Length | 3381 bp |
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| Protein Length | 1126 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642727450 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_002018091 |
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| Protein GI | 194336297 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0784] FOG: CheY-like receiver
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.766255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCAAG ACAAATACGA TAAAAACGCA GACGAAGCTC ATGCCAGCAT GGTGCATGGG
AACATTGACT TGAGTTTGCT TGATATTTTT CCCGACATCT GTCTTCTTAT TGACAAGAAC
GGTTTAATTG TTTCGTCAAA TATACGCTTT GCTGCCAGAT TCCGCAGGCG TCCGGAAGAG
TGTCTGGGTC TCAATGTTTT CGATTTGCTT TCTCATGATC TCCTGATTCC TGAGACTGCT
GAACTACGCA GACATAAACT TGAGGAAGTT ATCTGCACTG GAAGGCAGCT TACCTTTGAA
GATGAACATG ATGGGCGCAG TTATCGCCAT ACCATTTATC CTCTCCGCTC TCTGGCAGGT
GACATCCAGA ACATGTTCAT TGTCGCACAG GATATAACGG ATCTGAAACG ATCTGAGCTG
GCAGGGGAGA ATGAGCAGGC GTTCAGAAAA GCAGTCATTG ATGTCATCCC TGGTATCTTT
TATCTGCTTG ATACAGAAGT CCGACTTTCC GGATGGAATG CCTATCTGCG GGATGACATT
ATGGGTAAAT CTGAAAGTGA GATGGCTGGC ATCAATGCGC TGGAGAGTAT CCATCCGGAT
GATTGGCTGA CTATTCAGAG TAAAATGCAG AACGTTTTGA TTGATGGGGT TGAGGAACGT
GCTGAAATAA GGGCATTGCG TCAAGGAGGG CCTGAAATTG TCTGGTTTCT GATGACGGCA
AAAAAAATAG TACTCAATGG AACCCCGTTT CTCATTGGTA TGGGAATCGA CATTACTGAA
CGCAAAAAGG CGGAGAGCGA ACTTCAGAAT CTGAACCGTT CACTTCTTGC GATCAGCAAT
TGTAATCAGG TACTTCTTCA CGCCCATGAT GAAACAGAAT TGTTGAGTGC AATCTGTCGT
ATCGTTGTTG AGATTGGCGG TTATCGGATG GCGTGGGTTG GCTATGCTGA AGATGATCCG
TCAAAAAGCG TACGTCCGGT TGCTCAGGCA GGCTTTGAAG AGGGTTATCT GGATATGCTG
ATGATCTCCT GGGCAGATGT CGAACGTGGT CGAGGGCCTG TGGGAACAAC AATCCGTACG
GGCCAGCCCT GTTCTGTCTG CAATGTGCTG TCAGATCAGC AATTTCTTCC CTGGCGTATT
GAGGCGATGG CTCGTGGTTA TGCTTCGGTT TTGAGTTTGC CTCTGAAATC CGACAATAAA
ACGTTTGGGG CATTGGCGAT CTATTCCATC GTTCCGGATG CCTTTAATGC CGGCGAGATG
ACGCTGCTCA CAGCTCTGGC CGACAATCTT GCCTATGGAA TTTCAATGTT GCGAACCCGC
AGGGCACAAG AGGCGGCAGA GGAGGCACTG CGTCAGAGTG AAGCCCGCTA CCGGAGCCTG
TTTCAGAATT ACCATACCGT GATGTTGATC AGTGATCCGG AGAATGGTAT GATTGTTGAC
GCCAATCCGG CAGCCATCAG CTTTTATGGC TGGGAGTTGA ATGAACTCTG CCGAAAAAAA
ATCAGCCAGA TAACTGTTTC GACGCCGCAA GAGGTTACGT CGGAAATGGA AGGAGGCTGT
AATGAGGAGA GTAATCCTTT TCATTTCCGT CATTGCCGCT CTGATGGCTC TGTTCGCGAT
GTGGAAGTTT TCAGCGCTCC CGTTGAAATT CAGGGAAAAA TGCTTCTCTA TTCCGTTGTT
CACGATGTTA CTGTGCGCCT GCGCCATGAA TCACTCATTC TCTTCCGTCA ACGTCTGCTC
CAGATGGCAG AGTCTCACTC GGTTGAGGAG CTGCTGAGAT TGACTCTGGA CGAAGCTGAA
AGAGGTACAG GGAGCAAAAT TGGGTTTTAT CACTTTTTCG GGGAGAATGA TGCGACATCC
CTGCAGGTTT GTTCGACCAA TGTATACAAG AATATGCAGG GGGGAGTGCA ACAGTTCACG
CATCCATATG TGAAAGGAGA GGAGTTGTGG GCTGATGTTC TGCATGGGCA GAGCGCCGTG
ATTACCAACG AATACAAAAG AGATGAGCGT CAGAATAACT TGCCGGGCAG CCATCCTGAA
ATAAAGCGAA CATTGGTCGT TCCTGTACTT CAGGGAGAGA AGATTGTGGG CTTTTTTTGG
GTTGGAAACA AGCCAGAGGC CTACATTGAT GACGATATTC ATTTGGTACG TACCATAGCA
GATAGTGCAT GGGATATCGT TTCTCGCAAG CTTGCCGAGC AGGCGCAACA GGAGATGCAG
TCAGCCCTTA CCCAGCTTCA GAAAATGGAG CTCGTCGGAC AGCTTGCCGG AGGTATCGCT
CATGATTTCA ATAACATGCT TGCTGTGATT ATCGGCAATA TAGAGATGGC TATGGATCAG
GAGGCTGCTT ATGAAGAGCC ATTACCATTC AATCTGAAAA ACATACTCAA TGCCGCTACA
CGATCTGCGC ATTTGACGCG TCAACTCCTC GCGTTTGCCC GAAAGCAACC GGTAATGCCA
TTGGTTCTCG AACTGAATAC GATGGTTGAA ACCATGCTTT CGGTTCTGCG ACGGCTGATT
GGTGAAAATA TCACCATTGT CTGGATTCCT GATACCCATC GTTGTCTGGT AAAAGTCGAT
CCATCACAGA TTGATCAGAT TCTTGTCAAT CTCTGCATCA ATGCCCGCGA TGCAATTGCC
GGAATAGGTA AAATTACTAT TCAAATCGGC AGGCTCTGTG AGAAAAAAAC TCTTGTTCCA
CCCTTGCATC CCTGTAAAAT AGTCGGTGAT TACGTAACAC TTTCGGTTCG TGATAACGGT
TGTGGTATTG AAAAAGAGCA TCTTCCCCAT ATTTTTGAGC CCTTTTTTAC CACCAAGGAG
CCGGGAAAAG GGACTGGTTT GGGACTTTCA ACAGTCTATG GCATTGTCAA ACAAAACAAT
GGTTGCCTCG ACTACAAGAG CGAACCGGGA AAGGGGAGTA CTTTTAAAAT TCACCTTCCC
CGATACCAGG AAGGTTATGG CGATATCGAA GAGGATGAAC CGGCTCCGCC AGAAGGCAAA
CAGGGTAAAG GAACGATACT CCTTGTGGAA AACGAACACG ATATTCTCAT CCTTTGTCGG
GCGGCACTTG AAGAGGCTGG ATACACTACG CTTTCGGCTG AGACCCCTCG TGAAGCAATC
CGGCTTGCCC GGCAATACAA CGGAGAGGTT GATATGCTTC TGACCGATGT TGTTATGCCT
GACATGAACG GTTGTGACCT TGCCAAAGAG CTTCAGTCGA TCATTCCGGA CCTTAAAACG
CTCTTTATGT CCGGTTATTC AAGTGATGTG ATTTCCCGGC ACGAGATGCT TGTCGAAAGG
GTTAACTTTA TTCAGAAGCC CTTCTCCCTG AAATTACTGA CCACGATGGT GCATAATTTG
CTCAATCATG CAAACCCATG A
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| Protein sequence | MLQDKYDKNA DEAHASMVHG NIDLSLLDIF PDICLLIDKN GLIVSSNIRF AARFRRRPEE
CLGLNVFDLL SHDLLIPETA ELRRHKLEEV ICTGRQLTFE DEHDGRSYRH TIYPLRSLAG
DIQNMFIVAQ DITDLKRSEL AGENEQAFRK AVIDVIPGIF YLLDTEVRLS GWNAYLRDDI
MGKSESEMAG INALESIHPD DWLTIQSKMQ NVLIDGVEER AEIRALRQGG PEIVWFLMTA
KKIVLNGTPF LIGMGIDITE RKKAESELQN LNRSLLAISN CNQVLLHAHD ETELLSAICR
IVVEIGGYRM AWVGYAEDDP SKSVRPVAQA GFEEGYLDML MISWADVERG RGPVGTTIRT
GQPCSVCNVL SDQQFLPWRI EAMARGYASV LSLPLKSDNK TFGALAIYSI VPDAFNAGEM
TLLTALADNL AYGISMLRTR RAQEAAEEAL RQSEARYRSL FQNYHTVMLI SDPENGMIVD
ANPAAISFYG WELNELCRKK ISQITVSTPQ EVTSEMEGGC NEESNPFHFR HCRSDGSVRD
VEVFSAPVEI QGKMLLYSVV HDVTVRLRHE SLILFRQRLL QMAESHSVEE LLRLTLDEAE
RGTGSKIGFY HFFGENDATS LQVCSTNVYK NMQGGVQQFT HPYVKGEELW ADVLHGQSAV
ITNEYKRDER QNNLPGSHPE IKRTLVVPVL QGEKIVGFFW VGNKPEAYID DDIHLVRTIA
DSAWDIVSRK LAEQAQQEMQ SALTQLQKME LVGQLAGGIA HDFNNMLAVI IGNIEMAMDQ
EAAYEEPLPF NLKNILNAAT RSAHLTRQLL AFARKQPVMP LVLELNTMVE TMLSVLRRLI
GENITIVWIP DTHRCLVKVD PSQIDQILVN LCINARDAIA GIGKITIQIG RLCEKKTLVP
PLHPCKIVGD YVTLSVRDNG CGIEKEHLPH IFEPFFTTKE PGKGTGLGLS TVYGIVKQNN
GCLDYKSEPG KGSTFKIHLP RYQEGYGDIE EDEPAPPEGK QGKGTILLVE NEHDILILCR
AALEEAGYTT LSAETPREAI RLARQYNGEV DMLLTDVVMP DMNGCDLAKE LQSIIPDLKT
LFMSGYSSDV ISRHEMLVER VNFIQKPFSL KLLTTMVHNL LNHANP
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