Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1201 |
Symbol | |
ID | 6463632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1253230 |
End bp | 1254186 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642727449 |
Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
Protein accession | YP_002018090 |
Protein GI | 194336296 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.439197 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCACAG CAGAGAAGAA ACAACCGTCG GTTATTGTTA TTCTTGGACC CACAGCTTCT GGCAAATCTG CCCTTGCTTT GGCAGTTGCA AAAAAGATCG GAGGTGAAAT CATCTCTGCC GATTCACGGC AGATTTACCG CGAATTTGAT ATCGGTGCAG CGAAACCTTC GGAGAGTGCG CTCGGGGAGA TAAGACACCA TTTTGTCAAT GAAAAAAATA TTGGAGAACC CTTCACGGCT GGTGACTTTG CCACAGAAGC TGCAGAGCGG ATTATCACTC TGCACCGAAG GGGAAAGCGT GCGGTTGTTG CTGGAGGATC CACACTCTAC CTTGAGGGGC TGATTGAAGG GTTTGCTGAT CTCCCTCCCG CAAACCCGGA AATAAGAGCA AGACTGCTTG GTGAACTTGA AGAGGAAGGA AACGAGAAGC TCTATGCAAA GCTGTTCGAA AGAGACCCCG ATCAGGCCGC AACTCTTGAC CCCACAAAAA GCCAGCGCCT TATCCGAAGT CTTGAAATCA TTGAGATAAC CGGTTTGAGC GTCACAGAGT TACAGGCAAG GGCAAAAAAG CGACAGCATG GTGACCTCTG CTTTGTCACT ACAGGGCTTG CAATGGAGCG TGCCACGCTC TATCAGCGTA TCAACCATCG TACTGATAAT ATGATTGATG CAGGACTCTA CGATGAGGCT AAAGGGCTTT ATCACAAGTA TCACAAACTG ATTGCCAGTG GAAAAGTATC TTCTCTGCAA TCGGTGGGAT ATCAGGAATT TTTTCAATAC CTCGATGGAA TGATCTCGTT TGATGATGCT GTTCGACTGA TAAAGCAGCA TACACGCAAT TATGCAAAAC GGCAGTTGAC TTTTTTTCAC AATCGGCTCA GCGTAAACTG GACAGATGCC CCATTGAACA GCAAGGAGCT TGACTCGCTG GCTGAACGGC TTTCAAAAGG CCCCTGA
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Protein sequence | MATAEKKQPS VIVILGPTAS GKSALALAVA KKIGGEIISA DSRQIYREFD IGAAKPSESA LGEIRHHFVN EKNIGEPFTA GDFATEAAER IITLHRRGKR AVVAGGSTLY LEGLIEGFAD LPPANPEIRA RLLGELEEEG NEKLYAKLFE RDPDQAATLD PTKSQRLIRS LEIIEITGLS VTELQARAKK RQHGDLCFVT TGLAMERATL YQRINHRTDN MIDAGLYDEA KGLYHKYHKL IASGKVSSLQ SVGYQEFFQY LDGMISFDDA VRLIKQHTRN YAKRQLTFFH NRLSVNWTDA PLNSKELDSL AERLSKGP
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