| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1177 |
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| Symbol | |
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| ID | 6460889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1231177 |
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| End bp | 1233018 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642727425 |
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| Product | GAF sensor signal transduction histidine kinase |
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| Protein accession | YP_002018069 |
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| Protein GI | 194336275 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA AGAAAATAGT TTCTGATGAG TTTCCGGCGA CTGAAAAGTG CCAGCAAGCG
CGAAAAAAAT CGCTTGACGC AATAATTCAG AAAAAACAAA AGGCAGCACT CCCTTTGCAC
GACAACACGG TATTGGACTA CAAAACCTCA CACAGAAATC TCATCGATTA CATGCGAAAT
GGTTACGTTT ATGGCAAAGT CATTTACGAA AAGAGAGCTG CGATCGATTT TATCCATCAA
GAGGTTAACA CTGGTTATGA GACCATAACC GGTTTGAAAA ATGTTATTGG AAAAAAAATA
TCCGAGATTT TTCCGGACAT CAACAAGACT CAGTCGAAGT TTCTCGAAAA ACATTTTCGG
GTAGCCGAAA CAGGAATTCC TGATCGGTTT GAAATCTATA TTGAACATTT GAAAAAATGG
TTTGACGTTT CCGTATACTG CCCGCAAAAA GGATATTTCG TTTCGATGTT CGATGAAGTC
ACCGAACGCA AGTACTACGA ATTTCTCCTG ACATTCCGGC TTCGCATTCT CCAGATGGCT
GAATGCTCAT CGGTGGAGCA ATTACTGCAG ACAACTCTCG ACGAGGCTGA ACAAATAACC
CAAAGCAGGA TTGGATTTGC TTTTTTTGTA GCAAAAGATC AGATGTCACT TTCTCTGCAG
TCAGTCTCAA CCAATACCGA AAAAGTGATC TGCCCAGGAA AAGAAAAGAG AAAGCATATA
CCGTTGGATA AGTCTGGAAT ATGGGCTGAT GCCATACGAG AGCAAAGAGC AGTGATGAAC
AATTATGAGC CAGCAATCAA GCATTACATG GGGATGGCAA AAGAATGCGA GACAGAGCTC
ATACGTGAAC TGGTGGTTCC TGTCATTCGG AACGACAGGA TAGTTGCTAC AATGGGTGTT
GGTAACAAAC CCGAGCCATA TGATGGGAAC GATGTGCGCT GGGTAACTAT ACTTGCCAAC
CTGACGTGGG ATATTGTAGC AAAAAAAATT GCCGAAGAGG AACGGGAAAA ACTTCAGCAG
CAGCTTCAGC AATCACAGAA AATGGAGATG GTCGGCCAAC TTGCCGCTGG CATGGCTCAT
GAAATCAACA ATCCCCTGAA TTTCATCGCT ATCAATTTTG CAAATATTCG GGAGATTACC
TCTGACTTGC GAATTATACT GACAGAGTAC AAAATAGTAA CCCAAAAATT TGAGGATGGA
ACGCTCTCTC CACTCGACGT ACAAAAACTG CGCAAAAGAG AGTCCGAGCT TAATGTAGAG
ATGCTGATTG ATGATATTCC CGAGATTATA GTCGAGTCCC AACGTGGCTT CGAACGCATT
ACCGCAGTCA TCAACAGCAT GAGAAACTTG TCGCACCGCT ACGCAATAGA CAAGAAGATT
CCTTTCGACA TCAATCAAGG GATCATCGAC ACCCTCACCA TCGCACGTCA TGAATACAGC
TCTTGCGCAG ATATTAAGAC CACCCTTGGA GAGTTACCGC TTATCGCCTG CAATCCGGAA
CAGATCAATC AGGTCTTTCT CAACCTGATT ATCAACAGTG TCCACGCCAT ACAGTCCCAG
AAACGACATG CAAACGGAAC CATCACCATT CAAACATGGT TCGACAGCAG CAATGTTTAC
TGTTCAATTG CAGATGATGG TCCTGGCATC CCTGAAGCAA TCCAAAAAGA TATTTTCAAC
CCTTTTTTTA CCACCAAAAA CTCACGAAAT GGTACCGGAC TGGGCTTAAG CATTTCCTGG
GATATTATTG TCGTCACACA CAAGGGAACT CTCGCCTTCA CTACGCCAGC AGAAGGTGGC
ACAATTTTTA CCTTGTCACT GCCACGCACA AATGATGATT AA
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| Protein sequence | MKNKKIVSDE FPATEKCQQA RKKSLDAIIQ KKQKAALPLH DNTVLDYKTS HRNLIDYMRN
GYVYGKVIYE KRAAIDFIHQ EVNTGYETIT GLKNVIGKKI SEIFPDINKT QSKFLEKHFR
VAETGIPDRF EIYIEHLKKW FDVSVYCPQK GYFVSMFDEV TERKYYEFLL TFRLRILQMA
ECSSVEQLLQ TTLDEAEQIT QSRIGFAFFV AKDQMSLSLQ SVSTNTEKVI CPGKEKRKHI
PLDKSGIWAD AIREQRAVMN NYEPAIKHYM GMAKECETEL IRELVVPVIR NDRIVATMGV
GNKPEPYDGN DVRWVTILAN LTWDIVAKKI AEEEREKLQQ QLQQSQKMEM VGQLAAGMAH
EINNPLNFIA INFANIREIT SDLRIILTEY KIVTQKFEDG TLSPLDVQKL RKRESELNVE
MLIDDIPEII VESQRGFERI TAVINSMRNL SHRYAIDKKI PFDINQGIID TLTIARHEYS
SCADIKTTLG ELPLIACNPE QINQVFLNLI INSVHAIQSQ KRHANGTITI QTWFDSSNVY
CSIADDGPGI PEAIQKDIFN PFFTTKNSRN GTGLGLSISW DIIVVTHKGT LAFTTPAEGG
TIFTLSLPRT NDD
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