| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1176 |
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| Symbol | |
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| ID | 6463563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1229649 |
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| End bp | 1231037 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642727424 |
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| Product | Carotene 7,8-desaturase |
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| Protein accession | YP_002018068 |
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| Protein GI | 194336274 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3349] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02731] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.180076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTCAG AAAAAAAGTC AGTGTTGATT CTTGGTGGTG GCCTTGCAGG TCTGACTGCC
GCCAAACGTT TAACCGATAA CGGGTTTCAG GTAAAGGTAC TTGAAAAAAG AACGATCTTC
GGAGGGAAAG TATCGGCATG GAAAGATGAT GAGGGTGACT GGATCGAATC AGGAACCCAC
TGTTTTTTCG GTGCCTACAG TGTACTCTAC GATCTTATGA AAGAGATCAA AACCGCTCAT
GCTGTTGTCT GGAAAGAGCA CCAGCTCACC TATACCCTTG AGGGAGGAAA GCGCTTTACC
TTTCATACCT GGGATCTTCC CAGTCCATTG CATCTTCTGC CTGCGATTGT CAAAAATGGC
TATTTTACTT TTGGCGAAAT GGTGGCGTTT GCGAAATCTC TGATTCCTCT CGCACTGAAA
AAAGAGAAGT ATCCTCCAAC ACAGGATCAT CTGACCTTTA CCGAATGGGC AAAAGAGAAA
AAATTTGGCA ATCGACTTCT TGAGAAGATG TTTCGTCCGA TGGCTCTTGC CCTGAAGTTT
ATTCCGCCCG AAGAGATTTC TGCCAAGATT ATCCTTGATG TTACCGAGAC TTTTTACCGC
ATTCCTGATG CCTCCCGAAT GGGCTTTCTC AAAGGATCTC CCCAAGAATA TCTGACACAG
CCCCTTATTG ACTACTCGGA ATCGAGGGGA GCAATTTTCA AGAATGGAAC AGTTGTCGAT
GAGTTGCTTT TCGATGGCGC TGAAATTAAT GGCGTTCAGC TTCGCAATGG CGAGATTCTG
ACAGCCGATT ACTACCTTTG CGCACTGCCG ATTCATAATC TGAAAAGGGT TTTGCCTGAT
AATCTCAAAC GCCATGACCC GTTTTTTGGT GATCTTGACA AGCTTGAAGG GGTTCCTGTG
ATTTCTGTCC AGATCTGGTA CGACCGTGAA ATTACCTCTG CCGATAATGT GCTTTTCTCT
CCTGATGGAG TCATTCCTGT TTATGCCAAC CTTGCCCGTA CCACACCTGA ATACACAACA
CTCAGAGGAG AACCCTTCAA GGGCAAAACC CGTTTCGAGT TCTGTGTAGC TCCGGCAAAA
GATCTTATTG CACTCTCAAA GGAGGAGATT ATCCGCCTTG TTGACTTGAG TGTCAGAAAT
TGCTATCCAG AAACGTCACA CGGCGCAAAA ATTCTGAAGT CAACAGTAGT CAAAATTCCC
CAATCGGTCT ATGCGCCACT ACCTTTCATG GAGCAGTACC GTCCCACACA GAAAACACCG
ATCCGAAACC TTTTTCTTGC AGGCGGATTT TCTCAGCAAC TCTATTACGA CTCTATGGGT
GGTGCCGTGA TGAGTGCAAA TCTTGCTGTG GATGGGATTG TGAAAGATGC CAGGTTGAGA
GAGGGTTAG
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| Protein sequence | MSSEKKSVLI LGGGLAGLTA AKRLTDNGFQ VKVLEKRTIF GGKVSAWKDD EGDWIESGTH
CFFGAYSVLY DLMKEIKTAH AVVWKEHQLT YTLEGGKRFT FHTWDLPSPL HLLPAIVKNG
YFTFGEMVAF AKSLIPLALK KEKYPPTQDH LTFTEWAKEK KFGNRLLEKM FRPMALALKF
IPPEEISAKI ILDVTETFYR IPDASRMGFL KGSPQEYLTQ PLIDYSESRG AIFKNGTVVD
ELLFDGAEIN GVQLRNGEIL TADYYLCALP IHNLKRVLPD NLKRHDPFFG DLDKLEGVPV
ISVQIWYDRE ITSADNVLFS PDGVIPVYAN LARTTPEYTT LRGEPFKGKT RFEFCVAPAK
DLIALSKEEI IRLVDLSVRN CYPETSHGAK ILKSTVVKIP QSVYAPLPFM EQYRPTQKTP
IRNLFLAGGF SQQLYYDSMG GAVMSANLAV DGIVKDARLR EG
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