Gene Ppha_1165 details

Gene Information

• Locus tag: Ppha_1165
• ID: 6462923
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: +
• Start bp: 1216924
• End bp: 1217382
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 642727413
• Product: UspA domain protein
• Protein accession: YP_002018057
• Protein GI: 194336263
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0589] Universal stress protein UspA and related nucleotide-binding proteins

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000867886
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCAAGA TTCATGCGAT TCTTTGTCCC GTCGATTTTT CTGATGCTTC CCGCAAGGCG 
GTGCAGTATG CCAGAGAGTT TGCCTCGAAT ATGGGGGCCT CTGTCTATCT GCTCAATGTT 
GTGGAGCCGA GACCGATGGC AGTTGACATT ACCCTCAATT ATGTGCCGCT TGAAGAGGAT 
CTTGAAAAAG CCGCGGCAGA GGATCTTGAT ATTATTCTGC AGGAGTTTCT CGTTGCCGGA 
CTCAAGGCTG AGTGTGCCAT TGAGTTTGGC AATCCCTCTG ATGTGATCCT TGAGAAAGCA 
GCGGAGCTTG ATGTTAATCT CCTTATTATG GGTTCTCATG GTAAAAAGGG GCTGAGCCGT 
CTGATCATGG GCAGTGTGGC CGAGACGGTT GTTCGCAAGG CCAATTGTCC GGTACTGATC 
GTCAAGGCTG AGGAGAAGGA GTTTATCGGT GATGTGTGA 

 

Protein sequence

MFKIHAILCP VDFSDASRKA VQYAREFASN MGASVYLLNV VEPRPMAVDI TLNYVPLEED 
LEKAAAEDLD IILQEFLVAG LKAECAIEFG NPSDVILEKA AELDVNLLIM GSHGKKGLSR 
LIMGSVAETV VRKANCPVLI VKAEEKEFIG DV