| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1158 |
|---|
| Symbol | |
|---|
| ID | 6462995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 1208393 |
|---|
| End bp | 1209223 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642727406 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_002018050 |
|---|
| Protein GI | 194336256 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCATT ACAAGACATA TGAGTTGGAT GATCCGGAAG CTCCCTGGGT TGTTTTTGTT
CACGGGGCTG GAGGCAGTTC TTCAATATGG TTTATGCAAA TAAAAGAGTT CATCAGGCAT
TTTAATGTTC TGCTTGTTGA TCTCCGCGGG CATGGCAAGT CGAAAAGCAT TGTTGTTCCC
AAAGATAAAC ACTATTACGA CTTTGGGGAT GTTACCCGTG ATATTCTTGA GGTTCTCGAC
ACTCTGAATA TCCAGAAAGC ACACTTCATC GGCATTTCAC TCGGAACCAT CATTATTCGT
AATCTCAGCG AAATTGCTCC CGGCAGGGTC ACTTCCATGA TTATGGGTGG GGCTATCATA
AGGTTGAATG TACGGGCAAA AGTGCTTGTT ACCCTTGGAA ACATGTTCAA GAGGTTCGTT
CCCTACATGT GGCTTTACAG TTTTTTTGCG TGGATTATTA TGCCAAGCGA GCGACATAAA
CGCTCAAGGT TGCTCTTTGT CAATGAAGCC AAGAAGGTGG CTCAGAAGGA GTTTATGCGC
TGGTTCACAT TGACCTATGA GATCACGCCA CTGTTAAAAT ATTTTGAAGA GAAAGATACA
GCAATTCCTA CGCTCTACCT TATGGGTGAC GAAGATCATA TGTTTCTTCC TGCTGTTCGT
TACATCATAA CGAAACATAC CAATTCGTGG CTTGAGGTGA TCGGAAATTC CGGTCATGTC
TGTAATGTCG ATCAACCCAA GGAGTTTAAT TCCCGCGCGA TTCACTTTTT GAAAAGCATG
TCGTCGGTCA CCTCGACTGA AGAATCAGTA GTACGTTTGG CAGCCTGTTA G
|
|---|
| Protein sequence | MLHYKTYELD DPEAPWVVFV HGAGGSSSIW FMQIKEFIRH FNVLLVDLRG HGKSKSIVVP
KDKHYYDFGD VTRDILEVLD TLNIQKAHFI GISLGTIIIR NLSEIAPGRV TSMIMGGAII
RLNVRAKVLV TLGNMFKRFV PYMWLYSFFA WIIMPSERHK RSRLLFVNEA KKVAQKEFMR
WFTLTYEITP LLKYFEEKDT AIPTLYLMGD EDHMFLPAVR YIITKHTNSW LEVIGNSGHV
CNVDQPKEFN SRAIHFLKSM SSVTSTEESV VRLAAC
|
|---|
| |