Gene Ppha_1153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1153 
Symbol 
ID6462257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand- 
Start bp1201859 
End bp1202860 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content47% 
IMG OID642727401 
ProductADP-L-glycero-D-manno-heptose-6-epimerase 
Protein accessionYP_002018045 
Protein GI194336251 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID[TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGTTA TCACTGGCGG CGCAGGATTT ATTGGAAGCG CCATGCTTTG GGAGCTCAAC 
AGAAGAGGTG AAGAGAATGT CATCATTGTC GATGATCTTG GGTTCACAAC CACAGAAAAA 
TGGCGCAATC TTTCCGGACT TCATTTTGCC GATTTTATTC CCATAGAGCT TTTTCCCGGC 
CTGCTCGAAA GAAATGCACT CGAAGGGATC TCGGCTATCA TCCATATGGG CGCGAATAGT 
TCGACAACAG AAACCGATGC CGACCATCTT CTTGCCAACA ATTTCGGCTA CTCAAAAAAA 
ATTGCTTCGT TCTGCATGCA GCATGAAGTA CGACTTATCT ATGCATCAAG CGCAGCAACC 
TATGGTGACG GATCGAACGG ATACAGTGAT GCCATTGAAG GGATGGCTGC ACTCCGACCA 
CTGAATATGT ATGGATACTC CAAACAGCTC TTTGACCACT GGGCAGTGAA GCACCATATC 
CTCAATCATG CCGCTGGTCT GAAATTCTTC AATGTCTACG GCCCAAACGA ATATCACAAG 
GGAGATATGA GCAGTGTCGT CTATAAGGCG TTTCATCAGA TAGGCGAACA TGGGGTATTG 
AATCTCTTTC AATCGCACAG GCCAGACTAC CGTGATGGTG AACAATCAAG GGATTTCGTC 
TACATCAAAG ATTGTACCCG AATTATGGCA TGGATGCTTG AAACCCCTTC AGCAACCGGA 
CTCTTCAATA TCGGCTGCGG AACACCAAGA AGCTTCAATG ACCTTGCGGC TGCAACGTTC 
TCCGCGCTTG ATCGTCAAAT CCTCATCAAC TACACACCCA TGCCGGAGAG CCTTCGTGAT 
AAATATCAGT ACTACACCTG CGCGGATATC ACTCGGCTGC GAGAGGCAGG ATTCAGCGAA 
ACGCTCACCT CAATCGAGGA TGGTATTAGA GAATATGTGC AACACTACCT CGCATCTGCC 
AATCCATATT TTGACTACAC AAAGCCCACT TCCAATGCAT AA
 
Protein sequence
MIVITGGAGF IGSAMLWELN RRGEENVIIV DDLGFTTTEK WRNLSGLHFA DFIPIELFPG 
LLERNALEGI SAIIHMGANS STTETDADHL LANNFGYSKK IASFCMQHEV RLIYASSAAT 
YGDGSNGYSD AIEGMAALRP LNMYGYSKQL FDHWAVKHHI LNHAAGLKFF NVYGPNEYHK 
GDMSSVVYKA FHQIGEHGVL NLFQSHRPDY RDGEQSRDFV YIKDCTRIMA WMLETPSATG 
LFNIGCGTPR SFNDLAAATF SALDRQILIN YTPMPESLRD KYQYYTCADI TRLREAGFSE 
TLTSIEDGIR EYVQHYLASA NPYFDYTKPT SNA