| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1123 |
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| Symbol | |
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| ID | 6462682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1158045 |
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| End bp | 1161554 |
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| Gene Length | 3510 bp |
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| Protein Length | 1169 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642727369 |
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| Product | helicase domain protein |
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| Protein accession | YP_002018019 |
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| Protein GI | 194336225 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATTG AAGATATCAT CCAAGGCAGT TCCCTTACAG GTCTTGAACC TTCGGCTGTT
GCAACGGTTA TAGCCGTTGT GCCAATTGCC GATGGAGCTG TCCGGGTTAT CTACCAGACG
CCTGATGGTA CACTCAAAGA ACGGCTTTTG GGCCGGACTG ATGAAGCGAG CATTGCTGTT
GCTATCAGTG AGCGCCCCTG GTCTTTTGAC GGAGATGGTG AGGCATTCAA ACTTACGGTT
GAAGCCAAGC GCATTGATCT TGCTTTTCTG TTTGATCCGA TGATGGCCGT TCATACTTCA
AATGTAGAGC CCCTTCCGCA TCAGATCACG GCTGTTTATG AAGCCATGTT ACCCCGTCAA
CCGCTGCGGT TTGTTCTTGC GGACGATCCC GGTGCGGGCA AGACCATCAT GGCAGGCCTT
TACATTCGTG AGCTTATCAT GCGTGCCGAT GCTCGGCGTA TCGTAATCGT TGCGCCCGGC
AGTCTGGTTG AGCAGTGGCG TGAGGAGCTG TTCGAGAAGT TCGGGCTCGA ATTCCGAGTA
TTCACCAGAG ATCTTGAAGC GGCTACTCCG AGCGGAAATC CTTTTGAAGA CATCGATCAC
CTTATTGTTC GTCTCGACCA GATGGCCCGA AACGAAGAGC TGCAAGAGAA GCTTTGTGCT
GCCGGATGGG ATCTTGTCGT GTTCGACGAG GCGCACAAGC TTGCAGCACA CTTTTTCGGC
AATAAAATGC AGAAGACGGG CCGCTTCAAG CTGGCCGAAA AGCTTGGGGC CCAGACTCGC
CATCTCCTGC TGATGACGGC AACGCCGCAC AGTGGCAAGG AGGAGGATTT TCAGTTGTTC
CTCTCACTCC TCGACTCCGA CCGCTTTTAT GGCAAGTTTC GTGATGGTGT TCACAAGGTT
GATTGTTCCG ACCTTATTCG CCGCATGGTT AAGGAGAAAC TGGTCAAGTT TGATGGCACA
CCTCTTTTTC CCGAGCGAAA GGCATATACA GTCAATTACC AGCTTTCAGA CCTTGAAGCG
GCACTCTACG AAGCAGTAAC CGATTATGTG AAGACAGAAA TGGGCAAGGC TGACCAGCTT
GACGGTAAAC GAAAGGGTTC CGTGGGCTTT GCACTCACCT CTCTGCAGCG TCGTTTGGCC
TCAAGCCCTG AAGCCATTTT CCAGTCACTC AAACGCCGAA GGGAACGCCT CGAACGTCGT
CTTCGTGAGG AAAAAATAGG AGCCAGAGGG CAAAAGCTTC TTGCTGAAAC ACTCATCGAT
GTTCCCGAGG ACGAGGATGA TTTCAACGCC GAGGAGCAGG AAACCATGGA AGAGACGCTG
GTTGTTCAGG CCACCGCTTC ACAAACCATT GCAGAACTCG ATGGTGAAAT ATTCATTCTC
CAGGCTCTTG AACAGCAGGC CAAAGGACTC GTTGCATCCG GCAAGGATCG CAAGTGGGAT
GAACTTTCAC GCATTCTCCA GAACGAACCC CAAATGCGCG ATGCTGGCGG GCGGATGCGA
AAAATTATCA TTTTTAGTGA GCATCGGGAC ACGCTTAACT ACCTGCATGA AAAAATTGCC
GGTGTGCTTG GCAGTCATGA TGCAATCGTT GTCATTCATG GTGCCGTTCA CCGTGACGAC
CGCCGGAAAT CGCAGGAACT CTTTCGCTCT GACCCCGAAA TCCGTGTGCT TGTTGCCACC
GATGCAGCCG GTGAAGGTAT CAACCTTCAG AATGCCAATC TGATGGTGAA CTACGACCTG
CCCTGGAACC CCAACCGCCT CGAACAGCGC TTCGGGCGTA TTCATCGTAT TGGCCAGCAG
GAGGTCTGTC ATCTCTGGAA CCTTGTAGCC AAGGAGACTC GTGAAGGTGA TGTCTATTTC
CGCTTGCTTG AAAAGCTTCA AGTGGTCAGT GAAGCACTCA AGGGCGAGGT ATTTAACGTT
CTGGGTGAAG TGTTTGATGG CATCAGCCTC AAGGATTTGC TCATGCAAGC GATACGCTAC
GGTGACAAAC CAGAGGTGCG TGCCCGCCTC AGCCAGAAAA TTGATATCGC TCTCGATCTT
GACCACCTGA AGGAGATTCT CAAACGCGAT GCACTTGCGC AGGAAAGTTT CAGTGCGGAG
CGTCTCTTTG CCGTGAAGGA AGAGATGGAA AAGGCCGAAG CCCGCCGGCT TCAGCCCTTT
TTTGTTCGCT CCTTCTTTAT GAAAGGATTT GAGTCGCTCG GAGGTTCAAT CTATCCCCGA
GAATCTGGCC GTTTTGAAAT CACAAATGTT CCCGCCGAGT TGCGTGAACG CGACCGCCTC
ATCACCGGGC GTAATCGCCG CGATCTTGCT CCAGTGCTCC GCCGCTATGA ACGGGTTTGT
TTTACCAAGG AGTCCGTGCG TCCGGTTGAT AAACCCGGCC TTGCCTTCGC CAATATGATT
CATCCCGGTC ACCCGCTTAT GCTTGCTCTT AGTGATCTCT TGCTGGAGCA GCACGCCAAC
CTCCTCCGTC AGGGTACCAT CCTTGTTGAT CCGGCGGATG ATGGCGATCA GCCCTCTTTG
CTCTTTCTCC TTACCCACGA GGTGAAATCC GGTGATGGCA TGGTCATTTC CAAACGCCTG
CAATTTGTTC GGGTTTTACC CGACGGCAGC ACTACCTTCG CTGGGTGGGC ACCGCATTTA
GACCTTGAAC CACTTGCGTC TGCCCAGCGA CCACTTCTGA CAGAAACACT TGCTGCTCCT
TGGCTCAACT CCGGACTCGA AAACCGTGCT CTTGCCCTGG CAGCATCTAC ACTTGTCCCT
CAGCACTTCA GTGAGGTAGC TGACCGCCGG ATTGCCCATA TAGACAAGAC TCTTGCCGCT
GTCCACGAGC GTCTGACAAA AGAGATAAAT TTCTGGTCAG ACCGTTTCGA GAAGCTTACC
GACGACAAAA AAGCAGGAAA GGATGTACGG CTTAACCTTG AAAATGTTCG CCGCACGCTC
AGCGATCTCG AAGCCCGGCT GGAGCATCGC AAAAAAGAGC TGCTCTCCAT GCGTCACGTC
AGCTCCGCCA CACCGGTTCT GCTCAGTGGT GCACTGGTTA TTCCTGCCGG ATTGCTTCGC
TTCCTGCAAG GTGAATCTGC ATCTTGCGGC TCTACATTTT CTGCTGATCC CGCAGCCCGT
TCACGCATCG AGCAGCTTGC TATGCAGGCT GTCCGCCAGT CTGAAGAATC CAGAGGGTGC
CGAGTAGTTG ATGTCTCCAC TCAGAAATGC GGTTGGGACA TTACCTCATA CCCGCCGGCA
ATTGATGGTA AACAACCTGA ATCCCGCCAT ATCGAAGTCA AGGGGCGAAT AAAAGGTGCA
ACAACGATTA CCGTCACCCG TAATGAAATG CTCTATGCCC TCAATCAGGC CGAAAAATTT
GTGCTGGCCA TTGTGCAGGT TGATGAGAAT GAGCAGATTG ATGGCCCGTA CTATCTACGG
AACCCCTTCG ATGCCGAACC GGGTTGGGGA GTATCATCAA TCAATTTTGA AATCAGCGAA
TTTCTGAAAA AGGCAGAAAT TAACTTGTGA
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| Protein sequence | MRIEDIIQGS SLTGLEPSAV ATVIAVVPIA DGAVRVIYQT PDGTLKERLL GRTDEASIAV
AISERPWSFD GDGEAFKLTV EAKRIDLAFL FDPMMAVHTS NVEPLPHQIT AVYEAMLPRQ
PLRFVLADDP GAGKTIMAGL YIRELIMRAD ARRIVIVAPG SLVEQWREEL FEKFGLEFRV
FTRDLEAATP SGNPFEDIDH LIVRLDQMAR NEELQEKLCA AGWDLVVFDE AHKLAAHFFG
NKMQKTGRFK LAEKLGAQTR HLLLMTATPH SGKEEDFQLF LSLLDSDRFY GKFRDGVHKV
DCSDLIRRMV KEKLVKFDGT PLFPERKAYT VNYQLSDLEA ALYEAVTDYV KTEMGKADQL
DGKRKGSVGF ALTSLQRRLA SSPEAIFQSL KRRRERLERR LREEKIGARG QKLLAETLID
VPEDEDDFNA EEQETMEETL VVQATASQTI AELDGEIFIL QALEQQAKGL VASGKDRKWD
ELSRILQNEP QMRDAGGRMR KIIIFSEHRD TLNYLHEKIA GVLGSHDAIV VIHGAVHRDD
RRKSQELFRS DPEIRVLVAT DAAGEGINLQ NANLMVNYDL PWNPNRLEQR FGRIHRIGQQ
EVCHLWNLVA KETREGDVYF RLLEKLQVVS EALKGEVFNV LGEVFDGISL KDLLMQAIRY
GDKPEVRARL SQKIDIALDL DHLKEILKRD ALAQESFSAE RLFAVKEEME KAEARRLQPF
FVRSFFMKGF ESLGGSIYPR ESGRFEITNV PAELRERDRL ITGRNRRDLA PVLRRYERVC
FTKESVRPVD KPGLAFANMI HPGHPLMLAL SDLLLEQHAN LLRQGTILVD PADDGDQPSL
LFLLTHEVKS GDGMVISKRL QFVRVLPDGS TTFAGWAPHL DLEPLASAQR PLLTETLAAP
WLNSGLENRA LALAASTLVP QHFSEVADRR IAHIDKTLAA VHERLTKEIN FWSDRFEKLT
DDKKAGKDVR LNLENVRRTL SDLEARLEHR KKELLSMRHV SSATPVLLSG ALVIPAGLLR
FLQGESASCG STFSADPAAR SRIEQLAMQA VRQSEESRGC RVVDVSTQKC GWDITSYPPA
IDGKQPESRH IEVKGRIKGA TTITVTRNEM LYALNQAEKF VLAIVQVDEN EQIDGPYYLR
NPFDAEPGWG VSSINFEISE FLKKAEINL
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