Gene Ppha_1122 details

Gene Information

• Locus tag: Ppha_1122
• ID: 6462688
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: +
• Start bp: 1157260
• End bp: 1157940
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 642727368
• Product: protein of unknown function DUF159
• Protein accession: YP_002018018
• Protein GI: 194336224
• COG category: [S] Function unknown
• COG ID: [COG2135] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGCGGAC GATTCGGGTT TTACGAACTG AAGTACTTTC TTGACCTTCT TCGCCAACTG 
GAGTTGCCGT TTGAAGAGAA TCAGGACTAC CCCCAGACGA ATCGTTACAA CATCCCTCCG 
GAAACAGATA TTCTAACTTT GCAGGCCAAC CATGGAGCTT ATAAGCTCAC CTCGGCACGA 
TGGGGGTTGA TTCCCTATTG GTCCAAAGAA CTTCCCAAAA TCAGGCCAAT AAACGCACGC 
TCTGAATCAT TGGTCTCGAA ACCCTATTAC CGACATCTTG TTGGGCGGAA CCACTGCCTG 
ATTCCAGCGA GCGGCTTTTA TGAATGGGAG CGCATCGACG GTAAAAAGAA GCAACCCTGG 
TACATCCACC GGGCAGATGG CTTGCCCATG GCATTTGCCG GACTATGGGA CACCTGGAAG 
TCGAAGCATA CCGAAGAGCC CGCAATCACG ACCTGTACCA TCATCACTAC AGTGGCAAAT 
GAGCAGATAG CACCTCTCCA TGACCGAATG CCCGTAATTC TCGAATCCGA AAACTGGAAA 
AGATGGCTCG AAGCTGATCC TCGAAATCTT TCGAAGATGC TGGTTCCCGC AGATAACGGC 
ATTCTGGAAA TGTATCAGGT ATCAACACTG GTCAACAATG CCCGCTATCA GAGTGGCAAC 
TGTATTGAGC AGGTTGAGTG A 

 

Protein sequence

MCGRFGFYEL KYFLDLLRQL ELPFEENQDY PQTNRYNIPP ETDILTLQAN HGAYKLTSAR 
WGLIPYWSKE LPKIRPINAR SESLVSKPYY RHLVGRNHCL IPASGFYEWE RIDGKKKQPW 
YIHRADGLPM AFAGLWDTWK SKHTEEPAIT TCTIITTVAN EQIAPLHDRM PVILESENWK 
RWLEADPRNL SKMLVPADNG ILEMYQVSTL VNNARYQSGN CIEQVE