| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1116 |
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| Symbol | |
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| ID | 6462724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1147242 |
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| End bp | 1148111 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642727362 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002018012 |
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| Protein GI | 194336218 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00899816 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGATAGAGG TTTCTCGTGA CATACCGGTA GCACGACTTG AAAATACGTT TTTCGGGATT
GTCGATATCG AAGATTCAGG GTTTGAACTG GCTCGTGAAA ATCACCGTCA CGATTTTTTT
GAGATTCTCT GGTTTACCTC TTCGGTCGGT GTGGCTCATT ATATTGATTT TGAACCCTAT
CCTGTCGAAT CGGGTCTTGT TTATTTTATG GCTCCCGGTC AGGTTCATGC CTATGAGGGG
CCATCTCCAT CAGGTTATGT TATTGTTTTT TCGCTTGAGA TGTTCAGTAC AATCATGAAC
CCGCAACTCC GGGTGTTGTT TAATCCTTTC ATGAACAGCG GGGTCAGGAT AGGCGAGAGT
GAGCATGGAG TGCTTCTTCA GTTGGCAGGG CTTATGGCTC TTGAATGCCA GGGGAAGAAG
GACTTTTTCA TTCTGCGCTG TTATCTCAAG GTTTTTCTGC TTCAGATTGC AAGAATCCAT
CATGAATCTG CTTTTGCGCT TGACAAGGCC GGTCAACGCA TGAGCTTGCT GTTTGAGTTG
CTGGAAGCAA ATTTCCGCAA GGAGCGTCAT GCCGGGTTTT ATGCTTCGGC ACTCGGTATT
ACTCCAAAAC GACTCAACGA AATTCTTCAC CAAAAATTCG ATCTGACGTT GACTCGTATC
TTGCATATCA GGCTTATTCT TGAGGCCAAG AGGGAGATCG CGTATGGCAG AAAAAGTTTC
AAGGAGATCG CTTTTGAGCT TGGTTTCAGC GATCAGGCTT ACTTCAGCCG TTTTTTCAAG
GTTCAGACTG GCATGATGCC GGCAGCCTTC CGGAGCAGGA TGTTCCGGCA TGTAAAAAGT
GATGAGGCAG ATATTGGTTC AGATGGATAA
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| Protein sequence | MIEVSRDIPV ARLENTFFGI VDIEDSGFEL ARENHRHDFF EILWFTSSVG VAHYIDFEPY
PVESGLVYFM APGQVHAYEG PSPSGYVIVF SLEMFSTIMN PQLRVLFNPF MNSGVRIGES
EHGVLLQLAG LMALECQGKK DFFILRCYLK VFLLQIARIH HESAFALDKA GQRMSLLFEL
LEANFRKERH AGFYASALGI TPKRLNEILH QKFDLTLTRI LHIRLILEAK REIAYGRKSF
KEIAFELGFS DQAYFSRFFK VQTGMMPAAF RSRMFRHVKS DEADIGSDG
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