| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1102 |
|---|
| Symbol | |
|---|
| ID | 6462777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1132560 |
|---|
| End bp | 1132883 |
|---|
| Gene Length | 324 bp |
|---|
| Protein Length | 107 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642727348 |
|---|
| Product | small multidrug resistance protein |
|---|
| Protein accession | YP_002017998 |
|---|
| Protein GI | 194336204 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2076] Membrane transporters of cations and cationic drugs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACTGGA TCTATCTGAT TATGGCGATT TTGTTTGAAG TATCCGGCAC CACCTGCATG
AAAATATCTG ACGGATTCAG TAAACTTGCA CCAACGCTTT TTATCTTTAT TTTTTACGGG
CTGAGTTTTA CCTTTCTTTC GCTGGCGCTC AAGGTACTTC CCATCGCCCT GACCTATGCA
ATCTGGTCAG GAATTGGAAC GGCAGCAATT ACCGTTATCG GAGTCATCTG GTTCGGTGAA
GGTATAAACG CCATTAAACT CGCATCCCTG CTGCTGATTA TTATCGGCGT TGCAGGGTTG
CATTTCAGTC AAGAGGTTCA CTAA
|
|---|
| Protein sequence | MHWIYLIMAI LFEVSGTTCM KISDGFSKLA PTLFIFIFYG LSFTFLSLAL KVLPIALTYA
IWSGIGTAAI TVIGVIWFGE GINAIKLASL LLIIIGVAGL HFSQEVH
|
|---|
| |