| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1094 |
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| Symbol | |
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| ID | 6462828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1126413 |
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| End bp | 1127726 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642727340 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002017990 |
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| Protein GI | 194336196 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.929439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAAC CATCAACCCT CCATAAAATG GGGCCGATTA CTCTGGCGCC GTCGGTGCTG
CCCCGCCACG CTCTGACCTA TCTCTATGCG GCTTTCTTTT CTATCGGGCT GGTCACCTTT
GTCTCGATCG GTCAGGCTTA TATCCTCAAC GAGCATCTGA AAATTCCCAC TTCGCAGCAG
GGAACCATCA GCGGCAATCT GGTTTTCTGG ACGGAAGTTG TCACGCTGCT CTTTTTTGTG
CCTGCCGGGG TTCTGATGGA TCGTATCGGG CGAAAACCGG TCTACAGCGC CGGTTTTTTT
CTGCTTGCAG TGGCTTATGC GCTCTATCCG CTTTCACGAT CCGTTTTTGA TTTAACTCTC
TACAGGATGA TTTATGCACT CGGTATTGTT GCGGTGACCG GTGCGCTCTC GACGGTGATG
ATCGACTATC CTGCTGAACG GTCGCGGGGA AAACTGATTG CCATAACCGG ATTTCTTAAT
GGTCTTGGTA TTGTGGTGCT GAACAGCTTT TTCGGCGGCT TGCCGATGCA GCTTGTTGCG
AAGGGGTTCA GCGGCAGTGA TGCCGGGCTC TATACGCATC TTGCCATTGC CGGAGTTGCG
CTGGTTTCGG CAGTGGTTGT TGCCTTTGGT CTGAAGGGCG GCACGGAGGT GAGCAAAAAG
GATCGTCCTG CTCTTCGCTC TCTTGTTACC AGCGGCATCC GGTGTGCCAA AAATCCGCGC
ATCCTTCTCT CTTACGCTGC CGCCTTTGTT GCGAGGGGTG ATCAATCCAT TATCGGCACC
TTTCTGCCTT TGTGGGGAAC GACTGCTGGA ATAGCCATGG GTATGGCGCC TGCCGAAGCG
GTCAAAAAGG GAATGATGAT TTTTATTATC TCACAGGCTG CGGCACTGCT CTGGGCGCCG
GTTATCGGTC CACTTATCGA CCGATGGAAC CGGGTTACTG CACTGACAAT CTGCATGGGA
CTGGCAAGCA TCGGCTATCT TTCGCTGGGG CTGATCAGCA ATCCGCATGA ACCTGCTTCA
ATTGTCAATT TCGTGCTCCT CGGCATAGGG CAAATCAGCG CCTTTCTCGG TTCGCAGTCT
CTCATCGGAC AGGAGGCGCC AAAGGCAGAG CGGGGGTCGG TTATCGGTAT GTTCAATATC
AGCGGCGCCG TGGGAATCCT TATCATCACG ACACTCGGAG GACGATTGTT TGACTCCATG
AGCCCGAAGG CACCGTTTAT TGTTGTCGGT GCCATCAACT CTCTGGTCAT GGTTGCGGGT
ATCTACGTCC GTATCAAGTT TCCGGGCACA GTACACCTGA ACGAACAGCA CTGA
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| Protein sequence | MNEPSTLHKM GPITLAPSVL PRHALTYLYA AFFSIGLVTF VSIGQAYILN EHLKIPTSQQ
GTISGNLVFW TEVVTLLFFV PAGVLMDRIG RKPVYSAGFF LLAVAYALYP LSRSVFDLTL
YRMIYALGIV AVTGALSTVM IDYPAERSRG KLIAITGFLN GLGIVVLNSF FGGLPMQLVA
KGFSGSDAGL YTHLAIAGVA LVSAVVVAFG LKGGTEVSKK DRPALRSLVT SGIRCAKNPR
ILLSYAAAFV ARGDQSIIGT FLPLWGTTAG IAMGMAPAEA VKKGMMIFII SQAAALLWAP
VIGPLIDRWN RVTALTICMG LASIGYLSLG LISNPHEPAS IVNFVLLGIG QISAFLGSQS
LIGQEAPKAE RGSVIGMFNI SGAVGILIIT TLGGRLFDSM SPKAPFIVVG AINSLVMVAG
IYVRIKFPGT VHLNEQH
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