| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1092 |
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| Symbol | |
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| ID | 6463472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1123475 |
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| End bp | 1124956 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642727338 |
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| Product | UDP-N-acetylmuramate |
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| Protein accession | YP_002017988 |
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| Protein GI | 194336194 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
[TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCAGA TGCAACACAG TAACCAGAAA CAGACAATCC AGTCAACGAT GAGTTCCTTC
TATTTTCTCG GTATCGGAGG TACGGCAATG GCATCCGTTG CCGTCGCACT TTCCCACGCA
GGTCATGCCA TCAGCGGCTC TGATACGCAG CTCTATCCGC CTATGAGCAG CTATCTTGAC
GACCATAATA TCCGCTATTT CAGCGGTTTT TCCGATTCTA ACCTGCAGAG CGCCTCACCG
GATTTCGTCA TTGTCGGCAA TGCGATAAGC CGTGGAAACC CTGAACTCGA ATATGCCCTG
AACCATCATC TTGAGCTTCT CTCCATGCCG GAGCTGGTTC GACGCCACCT GATCGCCCAT
AACAGCTCCA TTGTGGTGGC GGGCACCCAC GGCAAAACAA CCACAACCTC TCTTGTCGCC
TGGTTGCTTG AACATGGCGG GCTCAAACCG GGATTTCTGG TTGGAGGCAT CCCTGAAAAC
TTTTCTCTTG GCTGCCGGGC TTCAGGGCGC AGTGAAGAGG GCTTTTTTGT GACGGAGGGT
GATGAATACG ATACCGCCTT TTTCGACAAA CGAAGCAAGT TCCTGCTTTA CCGCCCCGAC
ATCGCCATCA TTAATAATAT TGAATTTGAT CACGCCGATA TTTTCGACTC TCTTGAGGAT
ATCAAACGCA GTTTCAGGCT TTTTGTCAAT CTGATCCCCG GTAACGGAAC TCTGCTGGTG
AATGGTGATG ACAAGGTTGC TCTTGAAGTT GCCTCCAGGG CATTTTGCAG GGTTGAGCGG
TTTGGTTTGA CCAGGGAGTC AGAGTGGAGC GCCTGTAACC TGTCGGCAGA CAGCGAGGCA
TCAACCTTTG ACCTTCTCTA TCAGGGAACT CTCCTCGGCA GCATCCGCAT ACCCCTCTTC
GGCAACTACA ATATCATGAA CTCCCTTGCA GCAATTGCTG CAGCAACCCA CAGTGGTCTT
TCTGTTGAAG CCATCATACG CGCCATGCCT CTCTTTAAGC GCCCGAAACG GCGTATGGAA
ATTGTCGGCA CCTATGCGCA TAACATCACA CTCGTTGAGG ATTTCGCCCA TCATCCGACA
GCCATCCGGG TAACTCTTGA AGCTCTGGGA GAGCTGTATA CCGGAAGACG GATTATTGCC
TGTTTTGAAC CTCGCTCAAA CACTACCACC CGAAACATCT TCCAGCAGGA ACTTGCAGAG
TGTTTTGGCC CGGCTTCAAT TGTTGTCATG GGAATGGTTC ATCGGCCTGA ACGCTACGGA
GCCGAGCAAT CACTGAATAC CGGACGGCTG AAACAGGAGC TGCAAAATCA GGGAAAGGAT
GTCTTTCTCG CAGGCGAAAA CCCGACCAAC TATCCGGCTG ATATTGTAGA ATTTCTTCAC
CCGCAACTGA ATGAAAATGA TGTAGTTGTC CTGCTCAGTA ATGGAAGCTT TGGTAACCTG
AAAAATCTTT TAACAGAATG TTTAAAAAAA ATTCCTGAAT AA
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| Protein sequence | MLQMQHSNQK QTIQSTMSSF YFLGIGGTAM ASVAVALSHA GHAISGSDTQ LYPPMSSYLD
DHNIRYFSGF SDSNLQSASP DFVIVGNAIS RGNPELEYAL NHHLELLSMP ELVRRHLIAH
NSSIVVAGTH GKTTTTSLVA WLLEHGGLKP GFLVGGIPEN FSLGCRASGR SEEGFFVTEG
DEYDTAFFDK RSKFLLYRPD IAIINNIEFD HADIFDSLED IKRSFRLFVN LIPGNGTLLV
NGDDKVALEV ASRAFCRVER FGLTRESEWS ACNLSADSEA STFDLLYQGT LLGSIRIPLF
GNYNIMNSLA AIAAATHSGL SVEAIIRAMP LFKRPKRRME IVGTYAHNIT LVEDFAHHPT
AIRVTLEALG ELYTGRRIIA CFEPRSNTTT RNIFQQELAE CFGPASIVVM GMVHRPERYG
AEQSLNTGRL KQELQNQGKD VFLAGENPTN YPADIVEFLH PQLNENDVVV LLSNGSFGNL
KNLLTECLKK IPE
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