Gene Ppha_1091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1091 
Symbol 
ID6463480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand- 
Start bp1122358 
End bp1123362 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content49% 
IMG OID642727337 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_002017987 
Protein GI194336193 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAG TAAAAGTCGG CATTAATGGA TTTGGCCGCA TCGGGCGTCT GGTTTTTCGC 
CAGGCACTGA ACAACCCGAA TTATGAAATT GTTGCAATCA ACGACTTGTG TGACCCGAAG 
ACCCTCGCGC ACCTTCTCAA GTACGATTCA ACCCACAAAA AATTCAATGG CCAGGTAAGT 
GTTGAGGGCA GCAATCTGGT CGTCAACGGC AAGGTTATCA CCATTACCGC TCAGCGTGAC 
CCGGCATCAC TTCCCTGGAA AGAGCTTGGC TGTGATCTGG TTGTTGAATC AACCGGCATC 
TTTACTTCAA GAGAAGGCGC ATCAAAGCAT CTTGCTGCAG GTGCAAAAAA AGTTATCATT 
TCAGCTCCGG CAAAAGACAA AATTGACGCC ACCATCGTGC TTGGTGTTAA TGGCGACTCG 
ATCACCGGCA AAGAGGAGAT CGTTTCAAAC GCAAGTTGCA CAACAAATTG CCTTGCTCCA 
ATGATGAAGG TGCTGCAGGA TAATTTCGGC ATCGAAAAAG GGTTCATGAC CACCGTTCAT 
GCCTACACCA ACGACCAGAA CATCCTTGAT CTTCCGCACT CCGATCTTCG CCGTGCCCGT 
TCAGCCGCAT TGTCCATCAT TCCGACCAGC ACCGGCGCAG CAAAAGCTAT TGGCGAGGTT 
ATTCCTGAGC TCATCGGTCG CCTTGACGGT TTCGCCATGA GAGTACCTGT ACCAGACGGC 
TCCGTCACTG ATGTTACCGC CATTCTCCAG AAACCGGCAA CAAAAGCAGA GATCAACGCT 
GCCATGAAAA TCGCAGCAGA CGGGCCTATG AAGGGATTCA TGGAATACTG TGAAGATCCT 
ATCGTTTCAC AGGACATCGT CGGCAACCCA CACTCCTGTA TCTTTGATTC ACTGCTCACC 
ATGAGCTCTG GCAATCTGGT AAAGGTAGTC GGCTGGTATG ACAACGAACT TGGATACTCA 
ACCAGAGTTA CCGATCTTCT TGATATCTAC TCGAAATTTG TCTAA
 
Protein sequence
MAKVKVGING FGRIGRLVFR QALNNPNYEI VAINDLCDPK TLAHLLKYDS THKKFNGQVS 
VEGSNLVVNG KVITITAQRD PASLPWKELG CDLVVESTGI FTSREGASKH LAAGAKKVII 
SAPAKDKIDA TIVLGVNGDS ITGKEEIVSN ASCTTNCLAP MMKVLQDNFG IEKGFMTTVH 
AYTNDQNILD LPHSDLRRAR SAALSIIPTS TGAAKAIGEV IPELIGRLDG FAMRVPVPDG 
SVTDVTAILQ KPATKAEINA AMKIAADGPM KGFMEYCEDP IVSQDIVGNP HSCIFDSLLT 
MSSGNLVKVV GWYDNELGYS TRVTDLLDIY SKFV