| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1088 |
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| Symbol | |
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| ID | 6461355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1119004 |
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| End bp | 1120188 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642727334 |
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| Product | chaperone protein DnaJ |
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| Protein accession | YP_002017984 |
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| Protein GI | 194336190 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.038983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGAG AATATTACGA GGTTCTTGGT GTAGGCCGGA CGGCTACCAA GGATGAGATA
AAAAAAGCAT ACAGAAAGCT GGCCTTGCAG TTTCATCCTG ACAAGAATCC AGATAACAAG
GATGCTGAAG AGCACTTTAA AGAGGTGAAT GAAGCCTATG AGGTGCTGAG TAATGATGAC
AAACGCCGCC GTTATGACCA GTATGGTCAT GCAGGGGTGG GTTCTTCTGC CGCATCCGGT
GGTCAGCCGG GTGGTGGCGC CGATTTAAAC GATATTTTCA GTGCCTTCAA TGACATGTTC
AGTGGTGGCA GAAACAGGGG TGGAGGCTCT CCATTTGGCT TTGAAGATGC TTTTGGTGGC
GGCAGCAGAA GAGGGCGTGC CTCAGGCGGT ATTCCTGGAA CCGATTTGAA AATTCGTCTC
AAATTAACCC TTGAAGAGAT TGCCAAGGGC GTTGAAAAAA CACTGAAGAT CAAAAAACAG
GTTACCTGTA AAGAGTGTAA TGGCAGTGGT TCCAAAACAG GAGCAACCGA GAACTGTTCA
ACCTGCCATG GCAGCGGGGA GGTTCGGCAG GTTTCAAAAA CGATGTTTGG CCAGTTTGTC
AATGTTACGG CCTGTCCGAC ATGCGGAGGT GAAGGGCGGA TTATCAAGGA TCGTTGCCCC
GCCTGTTATG GTGAAGGTAT CAAACTTGGT GAGGTGACCG TCAAAGTTGC TGTTCCCTCA
GGAGTGGAGA ACGGAAACTA CCTGACACTT CGCGGCCAGG GCAACTCCGG GCCAAGAGGT
GGAGCCGCCG GAGACCTGAT CGTAGTGATT GAGGAGATAC CGCACGAGTT TTTCTCTCGC
AATGGCGATG ATGTGATTTA TTCGCTGGCC GTCAGTTTTC CGGATCTTGT TCTTGGTACC
AAGGTTGAGG TACCAACCCT TGATGGCGCG GTCAAACTGA CCATTCCTCC TGCTACACAG
CCGGAGACCA TGCTGCGCAT AGCGGGTCAT GGGATCGGTC ATCTGAGAGG ATCGGCCAGG
GGAGACCAGT TTGTGAAGGT CAATGTTTTT GTTCCGAAAG ATCTTTCCCA TCAGGACAGG
GAGTTGCTGA AAGAGATGCA GAAATCAGCA GGAATTTCAC CCTCAGCCCA TAATGACAGG
AATGCGAAAA GTTTTTTTGA AAAAGCGCGT GATATCTTCA GTTAA
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| Protein sequence | MKREYYEVLG VGRTATKDEI KKAYRKLALQ FHPDKNPDNK DAEEHFKEVN EAYEVLSNDD
KRRRYDQYGH AGVGSSAASG GQPGGGADLN DIFSAFNDMF SGGRNRGGGS PFGFEDAFGG
GSRRGRASGG IPGTDLKIRL KLTLEEIAKG VEKTLKIKKQ VTCKECNGSG SKTGATENCS
TCHGSGEVRQ VSKTMFGQFV NVTACPTCGG EGRIIKDRCP ACYGEGIKLG EVTVKVAVPS
GVENGNYLTL RGQGNSGPRG GAAGDLIVVI EEIPHEFFSR NGDDVIYSLA VSFPDLVLGT
KVEVPTLDGA VKLTIPPATQ PETMLRIAGH GIGHLRGSAR GDQFVKVNVF VPKDLSHQDR
ELLKEMQKSA GISPSAHNDR NAKSFFEKAR DIFS
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