| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1086 |
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| Symbol | |
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| ID | 6461586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1117253 |
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| End bp | 1118305 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642727332 |
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| Product | heat-inducible transcription repressor HrcA |
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| Protein accession | YP_002017982 |
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| Protein GI | 194336188 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0111351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTTTC GTGATCTCAA TCTGAGAGAG CGGCAGGTTC TTGGTATCAT TATCCAGGCC
TATGTTGTAA CTGCTGCTCC TGTCGGCTCA AGGTATATAG CCAGAAATTA CAATCTTGGT
TTTTCCGACG CCACGATACG CAATGTCATG GCTGAACTTG AAGATGAAGG CTATATCAGT
CAGCCGCATA CCTCAGCGGG TAGAATTCCG ACTGACAAGG GGTACCGTTA TTACGTTGAC
CTCATTATGA CCTTTCAGTC TCTTGATGAC AATGAGAAAA AGAGAATTGA GGAAAATATC
GGTCAAATCA GCATTGACCG AAAAGGCACC TCCTCCGATG TTCTTCTTTC GGCGGTAAAA
GTTCTTGGAA CAATTTCAAG GCAGTTGAGT GTTGTTTTAT CACCGACACT TTCCAATGCC
ATTTTTGAAA AACTGGATAT GGTGTTGCTG AGCTCGACGA GGATGATGGT AATTCTTTCT
ATCCAGTCGC TGTTTGTCAA GACCATTGTC ATGGAGCTTG ATCTTGAGGT CTCCCGCCAG
ACCATTGACG GGGTGGTTGA TATGCTCAAT CAGCGGTTGT CGGGACTGAC GCTTGCTGAA
ATCCGCCGAT CAATTACCCG GCGTCTTTCC GGATGCAGTT GTGACAGTGG CCTGAAAAAT
CTTATTGTAC GCTCTGCTGG TACACTCTTT GACGAGTCGC CCATTTTTGA ACGGCTCTAT
ATTTCCGGTA CCGAATATAT TGTTGATCAG CCCGAGTTCA AGCAGCCGGA CAAGGTTCGT
GAGCTTATCA CCATGATCGA AGACAAGTTC AGCATGGCAA AGCTCGTTGA AAACAGTGGC
CCGTCACGTA TGGATATTAC CATCAGTATT GGCAAGGAGA ATTGCGAACG GCAGGCGGAA
GATCTCACAA TTGTTTCAGC TCCATACTAT GTTGGCAACA TGGTTGGAAA ACTTGGGATT
CTCGGGCCGA AAAGAATGGA CTATGAACAC GCTGTCCGTG TTCTCAATTA TATGGCCGAT
AGCCTTTCAA CAACGTTGTC AGGTGTTAAC TAA
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| Protein sequence | MGFRDLNLRE RQVLGIIIQA YVVTAAPVGS RYIARNYNLG FSDATIRNVM AELEDEGYIS
QPHTSAGRIP TDKGYRYYVD LIMTFQSLDD NEKKRIEENI GQISIDRKGT SSDVLLSAVK
VLGTISRQLS VVLSPTLSNA IFEKLDMVLL SSTRMMVILS IQSLFVKTIV MELDLEVSRQ
TIDGVVDMLN QRLSGLTLAE IRRSITRRLS GCSCDSGLKN LIVRSAGTLF DESPIFERLY
ISGTEYIVDQ PEFKQPDKVR ELITMIEDKF SMAKLVENSG PSRMDITISI GKENCERQAE
DLTIVSAPYY VGNMVGKLGI LGPKRMDYEH AVRVLNYMAD SLSTTLSGVN
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