Gene Ppha_1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1084 
Symbol 
ID6462742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand- 
Start bp1115260 
End bp1115997 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content47% 
IMG OID642727330 
Producthypothetical protein 
Protein accessionYP_002017980 
Protein GI194336186 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000238107 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA TTTTTATTGC ACTCCTCATA GTGCTTTTTG CCGCCCAAGG CACACCCGCC 
GCCGCAGCAT CAAAATTTAC CGGAATCATG GAGATGGCGC TTACCATGCC GAACGGTTCC 
GCCAAAGTCA CCTACTCATT CGGGAAATCA GCACAACGCA TGGACATGGC CATGCAGATG 
AACAAAATAC CAGAGCAGCT CAAAACAACC GTGATTACCA AAGCCTCCCA GCCAGACCAG 
GCTTGGATCA TCAATCACCA GGCAAAAAAA TATAGCCTCG TCAACCTGAA AACCGCCGCC 
GAAAATGCTA TGCTGCTCGA TTTCGACAGT AACTATACCC TCACCAGGCT CGGAAAACAA 
TCCATAAAAG GCTATTCCTG TGAACACATC ATCCTGACCA GCACCACCGA AAAACTGGAA 
CTCTGGATGA CGCGCGACCT GGGTGATTTT TCGACCTTCA GAATCCTTCA GTCACAAAAT 
CCCCGTCTCT CCAACACAGA GCTTTCAAAA AAACTCAACA GTGAAGGCAT TGAGGGATTC 
CCCGTCAAGA TCACGCAATA TAACGATAAT GGAAAATACA TGATGGAACT TGTGCAAATC 
TGGCCAAAAG AGCTCCCTGC TTCCCAATTC GCTGTACCGG CAGGATATCA GAAAGTTGCC 
GACAACCAGA AGCCTCTCGG AGCGCAGGAG AAAGCACATC TGAAAAACCT TATGGAAAAG 
ATGAAAAAAT TTGATTAG
 
Protein sequence
MKTIFIALLI VLFAAQGTPA AAASKFTGIM EMALTMPNGS AKVTYSFGKS AQRMDMAMQM 
NKIPEQLKTT VITKASQPDQ AWIINHQAKK YSLVNLKTAA ENAMLLDFDS NYTLTRLGKQ 
SIKGYSCEHI ILTSTTEKLE LWMTRDLGDF STFRILQSQN PRLSNTELSK KLNSEGIEGF 
PVKITQYNDN GKYMMELVQI WPKELPASQF AVPAGYQKVA DNQKPLGAQE KAHLKNLMEK 
MKKFD