| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1083 |
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| Symbol | |
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| ID | 6463792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1113757 |
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| End bp | 1115202 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642727329 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_002017979 |
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| Protein GI | 194336185 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00408] prolyl-tRNA synthetase, family I |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000273538 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCAGACA AGATAACTTC AAGAAGCGAA GACTATTCCC AGTGGTATAT TGACCTTGTG
CGCTCGGCAA AACTGGCCGA TTATGCCGAT GTCAGGGGAT GCATGGACAT ACGGCCAAAT
GGCTACGCCA TCTGGGAAAA AATGCAGGCC GCCCTCGACA GAATGTTCAA GGAGACGGGC
CATGTCAATG CCTACTTCCC GCTCTTTATT CCTGAGAGCT TCATTGCAAA AGAGGCTGAA
CATATTGAAG GGTTTGCCCC TGAATGCGCC GTTGTCACCC ACGGCGGGGG TGAGGAGCTG
GCAGAAAAGC TCTATATCCG CCCGACATCG GAGACCATCA TCTGGTCATC CTATAAAAAG
TGGATTCAGT CTTACCGCGA CCTGCCGATT CTGATCAACC AGTGGGCCAA CGTTGTGCGC
TGGGAGATGA GAACCCGCCT TTTCCTCAGA ACCACCGAGT TTCTCTGGCA GGAGGGCCAT
ACCGCCCATG CAAACCCTGA AGAGTCGCAG GAAGAGGTGC TCCGCATGAT CAACGTCTAC
AAAACCTTTG CTGAAGAGTA TATGGCCATG CCGGTCATCA TGGGCAAGAA AACCGACAAC
GAAAAATTTG CCGGTGCGGT TGATACCTGG TGCATTGAAG CGATGATGCA GGACAGTAAG
GCGCTCCAGG CTGGAACATC CCACAACCTC GGACAGAATT TTGCAAAAGC CTTCGACTGC
CAGTTCCAGA CCAAAGATGG GGTGCTTGAC TATGTCTGGG CAACAAGCTG GGGTGTTTCG
ACACGATTGA TTGGCGCCCT GATCATGGCC CACTCGGATG ATCGCGGCCT GGTGCTCCCA
CCGAAACTTG CCACACGCCA GGTGGTTATC ATCCCCATTC TCAGGGGCGA CAAGGCCGCC
GTCATTGAAC GGGCCAATGC CCTTGCTCAA GAACTCAACA AAAACGGTAT TCCCTCCTTT
GTTGACAGCA GTGAACAGAA CTCCCCCGGA TGGAAATTTG CTGAATATGA GCTGCAGGGC
ATTCCAATCC GTATCGAACT CGGGCCACGC GATATCGAGA AGGGTATCTG CATCGCCGCA
CGACGCGACA CACTCGAAAA AACCGAACTG GCGCTCGACG AAACTCTGCC AGATCAAATC
AGCGAAATTC TGAACACCAT CCAGGAAAGC ATGTTCGAGC GTGCACTCCA GTTCCGCACC
GAGCACACCT TCGAAGTGCA GAGCTATGAA GAGTTCAAGG TGGCTGTTGA AAAGGGATTT
GTCATCGCCC ACTGGGACGG CACGGCAGAA ACTGAAGCAA AAATCAAGGC TGAGACCAAA
GCCACCATCA GGGTACTTCC CGAAGAGGCC GACTATATTG CGCAATACCG CATCGATGAA
CCCGGCACCT GTATCTACTC AGGAAAACCT GCCGCACGAA AAGTTGTCTT CGCAAAAGCA
TACTGA
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| Protein sequence | MADKITSRSE DYSQWYIDLV RSAKLADYAD VRGCMDIRPN GYAIWEKMQA ALDRMFKETG
HVNAYFPLFI PESFIAKEAE HIEGFAPECA VVTHGGGEEL AEKLYIRPTS ETIIWSSYKK
WIQSYRDLPI LINQWANVVR WEMRTRLFLR TTEFLWQEGH TAHANPEESQ EEVLRMINVY
KTFAEEYMAM PVIMGKKTDN EKFAGAVDTW CIEAMMQDSK ALQAGTSHNL GQNFAKAFDC
QFQTKDGVLD YVWATSWGVS TRLIGALIMA HSDDRGLVLP PKLATRQVVI IPILRGDKAA
VIERANALAQ ELNKNGIPSF VDSSEQNSPG WKFAEYELQG IPIRIELGPR DIEKGICIAA
RRDTLEKTEL ALDETLPDQI SEILNTIQES MFERALQFRT EHTFEVQSYE EFKVAVEKGF
VIAHWDGTAE TEAKIKAETK ATIRVLPEEA DYIAQYRIDE PGTCIYSGKP AARKVVFAKA
Y
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