| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1078 |
|---|
| Symbol | |
|---|
| ID | 6463799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 1109592 |
|---|
| End bp | 1110851 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642727325 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_002017975 |
|---|
| Protein GI | 194336181 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000110576 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAAC AGATACTCAA ATACCGCATC GAGCGTGAAC TTGGCCAGGG CGGGATGAGC
CGGGTCTACC TTGGTGTCGA TCCGGTGACT GGTCAGCGAG TGGCCATTAA GGCGTTATTG
CCGCATCTTG CCGGTGATCC CTATGTGCGA TCACTTTTTG AACGTGAGGC CAAAGCGTTG
GCAAAACTGG ATCATCCCGG TATTGTCAGT TTGATTGACT ACCACCCCGA TAAACTCTTG
CTGGTACAGC AGTATATCGA TGGAATGGAT CTGGAGGAGT ACATCACCCA CCACCGCGGT
CCCATTCCGG AAGAGGAGAG CAAGGAGCTT TTCTGCAAAT TGCTTGAAGC CTTTGCCTAT
GTGCACCGTA GCGGCGTTAT CCATCGTGAC ATCAAGCCCG CCAACATCCT CATGACCAGG
GGGAACCAGG TCAAGGTTGT GGACTTTGGG ATAGCCAAAG ACACCAACAT TGCCCGCGAA
ACGGCCACAG GCCTCAGCCC CGGAACCGTG GCCTACATGA GCCCGGAGCA GATCAAAAGC
AAGCAGGGGG AGCCGCTCGA CCATCGTACC GATATCTACT CCCTTGGCGT GGTGCTCCAT
CAGATGCTCA CCGGCAAAGC GCCCTACAAT ACAGCAACGG AGGAGGATTT TGAAATTCAA
TCCAAAATAG TCAAAGAGCC GCTGCCGAGG ATGAAGGGCA TCTACGAATA TGTCTCAAAG
GAGATGCAGG CCATTGTCGA CAAGGCAACA GCGAAAGATC GCAACCAGCG TTACCAGAGC
TGCGAAGAAT TTCTGCGAGC CATCAGGGCG CTCAGGCCAC AGCGACCACC AAAACCCGAC
TGGCGGGAGT GGCTGCGCGA CAAACGGGTT ATGGCTGGAG CAGTACTGTT GTTGCTGTTT
TTCGTGGGGC TCTTCGCATT CAGTAGTGCG CCAAAGCCTC CGGAAGTGCC TGTTGAGGAG
CCAGTTGCCG CTTTTCCTGT GCCACCGGTC GTTGTTGTTG TCGATTCAGC CGCCATAAAA
AGGGAGATGG CCCGGCAAGC CGCAGAAGGT CGGATAGCAA AGCGCCGGGA AAAGGCGCGT
CAGGCAGAGC TTGCGGGGCT CCGGCGTGAG AAAGACTCGC TTTCAGCGCT TCTGCTCTCC
AAAAGAAACC CTGTAAGGGT AAACCGTGCA TCTCTGACGG TCAAAAGAAA AGCAGTCGCC
CCTCCGGTAC CTGTTCCTGT TCCGGCAAAG CCCTCCAGAA TTGACGTACA AACGTTTTAA
|
|---|
| Protein sequence | MEQQILKYRI ERELGQGGMS RVYLGVDPVT GQRVAIKALL PHLAGDPYVR SLFEREAKAL
AKLDHPGIVS LIDYHPDKLL LVQQYIDGMD LEEYITHHRG PIPEEESKEL FCKLLEAFAY
VHRSGVIHRD IKPANILMTR GNQVKVVDFG IAKDTNIARE TATGLSPGTV AYMSPEQIKS
KQGEPLDHRT DIYSLGVVLH QMLTGKAPYN TATEEDFEIQ SKIVKEPLPR MKGIYEYVSK
EMQAIVDKAT AKDRNQRYQS CEEFLRAIRA LRPQRPPKPD WREWLRDKRV MAGAVLLLLF
FVGLFAFSSA PKPPEVPVEE PVAAFPVPPV VVVVDSAAIK REMARQAAEG RIAKRREKAR
QAELAGLRRE KDSLSALLLS KRNPVRVNRA SLTVKRKAVA PPVPVPVPAK PSRIDVQTF
|
|---|
| |