| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1076 |
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| Symbol | |
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| ID | 6463806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1106646 |
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| End bp | 1107887 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642727323 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_002017973 |
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| Protein GI | 194336179 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00722331 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAAGC CATATGAAAT TTCCAAAGAA CTTGTCTTGA AAGCGTATCA ACAAGTGAAA
TCTAATGGAG GTGCAGCCGG TGTAGACCGA GAATCGTTAC AGGCATTTGA AACAAAACTG
AAAGACAACC TGTACAAGGT ATGGAACAGG CTCAGTTCCG GCAGTTATTT TCCGCCGCCG
GTAAGGGGTG TGGGCATTCC GAAGAAATCT GGAGGAGTGC GTATGCTTGG TGTTCCAACC
GTGGCGGACA GGGTAGCTCA AAGCGTTGTA AAAATGGTGC TTGAGCCCAT ATTGGAACCA
GTTTTTCATG AAGATTCGTA TGGTTATCGT CCGGGGCGTT CAGCTCATGA CGCTATAGCT
GTAGTGAGGA AGAGAAATTG GGAATATGAT TGGGTTGTAG AATTCGACAT CAAGGGGCTG
TTTGATAACA TCGATCATGA GTTGTTAATG CGCGCTCTTC GGAAACATTG CCAAACTCCT
TGGGTTTTTC TTTACGTAGA GCGGTGGCTA AAGGCACCGA TGGAGACCCC GGAAGGTGAG
CTGATAGAAC GGACAAAAGG AACGCCCCAA GGGGGAGTGG TGAGTCCACT GTTGGCGAAC
CTGTTTCTGC ACTATGCGTT TGACCGGTGG GTGAGCGAAA ATCTACCCGG TGTGCCGTTT
TGTCGGTACT CCGATGATGG CGTTCTTCAC TGTAAAAGCA AGATACAGGC AGAGCTGGTA
AAGCGAAAGA TTGGTGAGCG TTTTCGTGAG TGCGGATTAG AGTTACACCC TGATAAGACG
CAAATAGTGT ATTGCAGGGA TAGCAATCGC AAGGACGAGC ATCCAGTAAA TCAGTTTACA
TTTCTTGGTT TTACCTTCTG TTCACGGGAA GCCAAGAAGA AAGATGGAAC TTACTTTATT
GGGTTTCTGC CGGGAGTAAG CCGGGATGCA CTGCGACACA TGCGGCAGAC GATCAGAAGG
TGGAAGCTAC AGCTCAAAAA CAGCTTGGAA CTTGCGGATT TATCAGCACA GTTCAACCCG
ATACTGAGGG GATGGAAGAA CTACTACACG CGATTTTACG GTTCAGCAAT GGCTCCGGTT
TGGCAACACA TGAACTATTA CTTGGCACAC TGGATGATGA GAAAGTACAA GCAATTGAGT
GGGCACAAAA CCAGAGCAAG CAGAAAACTG CGACTTCTGG CGGAAGAGAA TCCAAACTTA
TTTGCGCATT GGAAAGCGGG GTATACCTCG ATGGCTAGAT GA
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| Protein sequence | MTKPYEISKE LVLKAYQQVK SNGGAAGVDR ESLQAFETKL KDNLYKVWNR LSSGSYFPPP
VRGVGIPKKS GGVRMLGVPT VADRVAQSVV KMVLEPILEP VFHEDSYGYR PGRSAHDAIA
VVRKRNWEYD WVVEFDIKGL FDNIDHELLM RALRKHCQTP WVFLYVERWL KAPMETPEGE
LIERTKGTPQ GGVVSPLLAN LFLHYAFDRW VSENLPGVPF CRYSDDGVLH CKSKIQAELV
KRKIGERFRE CGLELHPDKT QIVYCRDSNR KDEHPVNQFT FLGFTFCSRE AKKKDGTYFI
GFLPGVSRDA LRHMRQTIRR WKLQLKNSLE LADLSAQFNP ILRGWKNYYT RFYGSAMAPV
WQHMNYYLAH WMMRKYKQLS GHKTRASRKL RLLAEENPNL FAHWKAGYTS MAR
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