Gene Ppha_1075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1075 
Symbol 
ID6463811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp1105475 
End bp1106140 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content42% 
IMG OID642727322 
Productprotein of unknown function DUF805 
Protein accessionYP_002017972 
Protein GI194336178 
COG category[S] Function unknown 
COG ID[COG3152] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0445985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCA ATGGCACTGT CATTAATGGC CGGAGAGTTC ATAATGAAGA GATATCGATA 
GAACATGGCA CTTCGGTTCT TTTTGCCGGA AAAATACCGC TCGTATGGGA AAGCGTTGAT 
GCGATTTTGC TCCCTCCTGC TGCAACCAGC ATATCAACCA CTCGTTCTTC AGCAAAGGGC 
CCATCGAATG CGTATCTCCA GTCCATCGAT TTTAAAGAGA TGCTCTTTTC TTTTAAAGGG 
CGAATCAACA GGTCTACCTT TTGGACCTAT ACTCTGGCCA TGGCTGTTGT TCAATTTATA 
GTCTACGGTT TTTATTTCAT GATCATGAAA GTTGCCTCTT CTGATTTCAC GTCGTTTACT 
GTAGTTACCT CTTTGCTTGT TCTTCTCGCA CTCTTGTTTG TTTGGCCTGG GCTTGCCTTG 
TCAGTAAAAA GATGCCATGA TCGCAACAAG TCAGGTTGGT TTCATCTTGT CTCTTTGGTG 
CCCTTATTGG GAATATGGTA CATCGTGGAA ATATTTTTTC TGAAAGGGAG TGATGGATAT 
AACCAATATG GTGAGGAACC TGTATATAAT CCAGCTTTGA CGCAATACAC CGTAATTGCC 
GCTGTATTAT CTCTCCTTTC ATATCTGTAT TGTATGTGGC AATATCTTGA CTATTGTGCG 
CTGTAG
 
Protein sequence
MSTNGTVING RRVHNEEISI EHGTSVLFAG KIPLVWESVD AILLPPAATS ISTTRSSAKG 
PSNAYLQSID FKEMLFSFKG RINRSTFWTY TLAMAVVQFI VYGFYFMIMK VASSDFTSFT 
VVTSLLVLLA LLFVWPGLAL SVKRCHDRNK SGWFHLVSLV PLLGIWYIVE IFFLKGSDGY 
NQYGEEPVYN PALTQYTVIA AVLSLLSYLY CMWQYLDYCA L