Gene Ppha_1069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1069 
Symbol 
ID6463822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1100203 
End bp1101753 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content46% 
IMG OID642727317 
ProductFHA domain containing protein 
Protein accessionYP_002017967 
Protein GI194336173 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.793595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCA TTAAAATTGG CCGTTCTTCC GAGAATGATA TCGTTATCAG CCCTCGTGAA 
GGCGATGTCT CCAAAGTGCA TGCGCTCCTC AAGATTGAAA GCGATGGTAC CATCAGAATC
AGCGATCTAA AATCGATGAA TGGCACCTCT GTCAACGGAA AGCGCCTGCA AGGGGCAGAA
GAGGTGGTTA TCACTCCGGA TGATGAGGTT CTGCTTGGGA GTCATTACCG GCTTGATGTG
TGGAGCTATC TGAAAGGCGC ACTCCCCGAC AAGGAGCGTG GCCATCAGGA GGTCATGGGT
GAAATCAGAA AAACGGTGAG CATCGGCAGA AATGCATCAA ATACCATTGT TCTGCCTTAT
GCGGATGTTT CAGGAGAACA TGCAGAGATT CTGCTTTACA AAAATGGGGA GATGTTGCTC
AAAGACAAGC ATTCGACCAA CGGAACCACC GTCAATGGTT TGGCGGTCAC CAGTAAAAAA
ATAGTGAGGG GCGATACCAT CGTTATCGGT GACGGGCATC TGCTGAGCTG GGAAACCCAT
CTGTTTGACA ATCCCGTCGT CCCGAAAAAA AAATCCATGC TACCGGCCAT TGCTGCGACT
GTTGTGCTCC TGCTCGCTGT CGGATTCTAT TTTCTCAAAG AGAAGATCAT GCCGGTTGGT
GTGATGGAAA AGTACGGAAA TTCAGTTGTC ATCATATACA ACGACTATGT GTACGAAGTT
GATTTAGGCG AGGATAAAAA GATCTATATG ACGAAAACCG ATAAAGGGTT TGAACTCTAT
AATCCCTCAC AAAATGAACC GATAACCATA ACTGGCAGTG GCTTTTTTAT CTCTGCGGAT
GGTAAGATCA TGACAAACCG TCATGTTGCC CTTCCCTGGG CTTATGACGA CAACACCAAA
GCGGTCAAAG CCTTTGTCGA CAATGAAATT GTTAAAGAGA TTGCGCGTCT TGAACAGGAT
AAATCCAACG CACTCATCGG AAATTTGGTT GGAGCACAAA TCAACGTGCT GCCCGTAATC
ACGACCCTGC ATGATTTGAA TAAGGTCAAT GTCGTCGTTT CCGGCAAATC ACTCTATCTT
GGAATCGGGC TTAATGACAC CTATATCAAT TCAAAAAGTG ACTTGATTGG TTGTCTCTAC
CTGCGGGATT CGGGAGATAA AAAGCTTGAT GTAGCGATGA TTCAGGTCAA GAACAAGTCA
TTGCCGGGGA AGGTGAAGGA GTATGTTCAT CTTGATGATG CTGTTACCGA TAAAAAGTTG
TTGAAACCGG GCATGAAGCT GATGATGATT GGCTACCCGG CCGGTTTTGC ATTAGGACAG
ACTACTGATG GACTGAAAGT AAATTTTGAG GAGGGTTCGC TTTCACGCAT TGCGGACGAT
ATCAACTTTG GCCACAACCT CCCCACCATT CCAGGATCAA GTGGTTCGCC GATTTTCAAT
GAAAAAGGAG AGCTTGTTGG CGTCAACAAT CAGCAGCTTG TCAATACACA GACCTTTAAT
ATGGCAATTC TGGCAAAACA TGCCCTCGAC CTTAACAACT CAACAAAGTA A
 
Protein sequence
MKIIKIGRSS ENDIVISPRE GDVSKVHALL KIESDGTIRI SDLKSMNGTS VNGKRLQGAE 
EVVITPDDEV LLGSHYRLDV WSYLKGALPD KERGHQEVMG EIRKTVSIGR NASNTIVLPY
ADVSGEHAEI LLYKNGEMLL KDKHSTNGTT VNGLAVTSKK IVRGDTIVIG DGHLLSWETH
LFDNPVVPKK KSMLPAIAAT VVLLLAVGFY FLKEKIMPVG VMEKYGNSVV IIYNDYVYEV
DLGEDKKIYM TKTDKGFELY NPSQNEPITI TGSGFFISAD GKIMTNRHVA LPWAYDDNTK
AVKAFVDNEI VKEIARLEQD KSNALIGNLV GAQINVLPVI TTLHDLNKVN VVVSGKSLYL
GIGLNDTYIN SKSDLIGCLY LRDSGDKKLD VAMIQVKNKS LPGKVKEYVH LDDAVTDKKL
LKPGMKLMMI GYPAGFALGQ TTDGLKVNFE EGSLSRIADD INFGHNLPTI PGSSGSPIFN
EKGELVGVNN QQLVNTQTFN MAILAKHALD LNNSTK