Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1069 |
Symbol | |
ID | 6463822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1100203 |
End bp | 1101753 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642727317 |
Product | FHA domain containing protein |
Protein accession | YP_002017967 |
Protein GI | 194336173 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1716] FOG: FHA domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.793595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCA TTAAAATTGG CCGTTCTTCC GAGAATGATA TCGTTATCAG CCCTCGTGAA GGCGATGTCT CCAAAGTGCA TGCGCTCCTC AAGATTGAAA GCGATGGTAC CATCAGAATC AGCGATCTAA AATCGATGAA TGGCACCTCT GTCAACGGAA AGCGCCTGCA AGGGGCAGAA GAGGTGGTTA TCACTCCGGA TGATGAGGTT CTGCTTGGGA GTCATTACCG GCTTGATGTG TGGAGCTATC TGAAAGGCGC ACTCCCCGAC AAGGAGCGTG GCCATCAGGA GGTCATGGGT GAAATCAGAA AAACGGTGAG CATCGGCAGA AATGCATCAA ATACCATTGT TCTGCCTTAT GCGGATGTTT CAGGAGAACA TGCAGAGATT CTGCTTTACA AAAATGGGGA GATGTTGCTC AAAGACAAGC ATTCGACCAA CGGAACCACC GTCAATGGTT TGGCGGTCAC CAGTAAAAAA ATAGTGAGGG GCGATACCAT CGTTATCGGT GACGGGCATC TGCTGAGCTG GGAAACCCAT CTGTTTGACA ATCCCGTCGT CCCGAAAAAA AAATCCATGC TACCGGCCAT TGCTGCGACT GTTGTGCTCC TGCTCGCTGT CGGATTCTAT TTTCTCAAAG AGAAGATCAT GCCGGTTGGT GTGATGGAAA AGTACGGAAA TTCAGTTGTC ATCATATACA ACGACTATGT GTACGAAGTT GATTTAGGCG AGGATAAAAA GATCTATATG ACGAAAACCG ATAAAGGGTT TGAACTCTAT AATCCCTCAC AAAATGAACC GATAACCATA ACTGGCAGTG GCTTTTTTAT CTCTGCGGAT GGTAAGATCA TGACAAACCG TCATGTTGCC CTTCCCTGGG CTTATGACGA CAACACCAAA GCGGTCAAAG CCTTTGTCGA CAATGAAATT GTTAAAGAGA TTGCGCGTCT TGAACAGGAT AAATCCAACG CACTCATCGG AAATTTGGTT GGAGCACAAA TCAACGTGCT GCCCGTAATC ACGACCCTGC ATGATTTGAA TAAGGTCAAT GTCGTCGTTT CCGGCAAATC ACTCTATCTT GGAATCGGGC TTAATGACAC CTATATCAAT TCAAAAAGTG ACTTGATTGG TTGTCTCTAC CTGCGGGATT CGGGAGATAA AAAGCTTGAT GTAGCGATGA TTCAGGTCAA GAACAAGTCA TTGCCGGGGA AGGTGAAGGA GTATGTTCAT CTTGATGATG CTGTTACCGA TAAAAAGTTG TTGAAACCGG GCATGAAGCT GATGATGATT GGCTACCCGG CCGGTTTTGC ATTAGGACAG ACTACTGATG GACTGAAAGT AAATTTTGAG GAGGGTTCGC TTTCACGCAT TGCGGACGAT ATCAACTTTG GCCACAACCT CCCCACCATT CCAGGATCAA GTGGTTCGCC GATTTTCAAT GAAAAAGGAG AGCTTGTTGG CGTCAACAAT CAGCAGCTTG TCAATACACA GACCTTTAAT ATGGCAATTC TGGCAAAACA TGCCCTCGAC CTTAACAACT CAACAAAGTA A
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Protein sequence | MKIIKIGRSS ENDIVISPRE GDVSKVHALL KIESDGTIRI SDLKSMNGTS VNGKRLQGAE EVVITPDDEV LLGSHYRLDV WSYLKGALPD KERGHQEVMG EIRKTVSIGR NASNTIVLPY ADVSGEHAEI LLYKNGEMLL KDKHSTNGTT VNGLAVTSKK IVRGDTIVIG DGHLLSWETH LFDNPVVPKK KSMLPAIAAT VVLLLAVGFY FLKEKIMPVG VMEKYGNSVV IIYNDYVYEV DLGEDKKIYM TKTDKGFELY NPSQNEPITI TGSGFFISAD GKIMTNRHVA LPWAYDDNTK AVKAFVDNEI VKEIARLEQD KSNALIGNLV GAQINVLPVI TTLHDLNKVN VVVSGKSLYL GIGLNDTYIN SKSDLIGCLY LRDSGDKKLD VAMIQVKNKS LPGKVKEYVH LDDAVTDKKL LKPGMKLMMI GYPAGFALGQ TTDGLKVNFE EGSLSRIADD INFGHNLPTI PGSSGSPIFN EKGELVGVNN QQLVNTQTFN MAILAKHALD LNNSTK
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