Gene Ppha_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1062 
Symbol 
ID6461011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1093974 
End bp1094900 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content47% 
IMG OID642727310 
ProductSporulation domain protein 
Protein accessionYP_002017960 
Protein GI194336166 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTATCTG AAAAGAGGTT ACTCCGCATT CGCAAAAGTG CCGCACAACT CTGCATTGCG 
CTCTCTGTTG CACTCTTCTT TCCAGCCATC CTGTATGCAG CCGAAGAACG TTCCTACGCA
CGTGAAATCA GGAAGTATGT CGATGAAGAT ACGGTTTATT TGTTAGAAAA TACGCAGCAA
AACATAACCC TGCCCTCTGA AAGAATCGTG GTTGAAGCTC TTCTTTGTGA AAGTGGCCCA
CAGGCAATTG AGCTCTTCCA GAAACAGTTG AGCGATTATC CAGACCCTGC ACTTGATCAA
ATCAGTAACT CACGAATAGC CGCCTACAAC CTGGCGCTCA ACAGCACTGC CCCGCTGCCA
AAGCTCTCAC GCCCTCTTCT TTCGGCGAAA CCACAAGAGT CTGGTGTGCA GGAAAGTTCG
AAGCAACAGC TCGCGTCAAT TTCGAGCAAG ACAAAGGAAG AAATAACTCC TCGCCCATCA
CCTGCGCCAG TAAAACCAGC TCAGGAATCA GCACCTCTTC CATCACCTGC GCCAGTAAAA
CCAGCTCAGG AATTAGCTCT TCGTCCATCA CCGGCAAAAG TAAAACCGAC TGAAGAATTA
GCACTTCGCC CCTCAACTGC GCAAGTAAAA CCGATTCAGC AAATATCGCC TCGTCCATCA
CCAACCACAG TAAAACCAAC TCAGGAATCA ACCTTTGCAG GAAGTTCCGG TTTTACCCTG
CAATTTGGTT ATTTCGGAAA CAAAGCAAAT GCTGAAAATT TGACCAAAAA GATCTCTCTT
TACGAACCGG TAGAAATCGT TGAGCAGGGG CAGTTCTATG GTGTTCGATT GAAAAAGTTA
TATGCCACAA AACAAGATGC TGGTGCATTG ATAAAAAAAC TGCCCTTCCC GGCTTTTATT
GTTCCAGTAA AAAAGACGCA GCAGTGA
 
Protein sequence
MLSEKRLLRI RKSAAQLCIA LSVALFFPAI LYAAEERSYA REIRKYVDED TVYLLENTQQ 
NITLPSERIV VEALLCESGP QAIELFQKQL SDYPDPALDQ ISNSRIAAYN LALNSTAPLP
KLSRPLLSAK PQESGVQESS KQQLASISSK TKEEITPRPS PAPVKPAQES APLPSPAPVK
PAQELALRPS PAKVKPTEEL ALRPSTAQVK PIQQISPRPS PTTVKPTQES TFAGSSGFTL
QFGYFGNKAN AENLTKKISL YEPVEIVEQG QFYGVRLKKL YATKQDAGAL IKKLPFPAFI
VPVKKTQQ