Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1062 |
Symbol | |
ID | 6461011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1093974 |
End bp | 1094900 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642727310 |
Product | Sporulation domain protein |
Protein accession | YP_002017960 |
Protein GI | 194336166 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTATCTG AAAAGAGGTT ACTCCGCATT CGCAAAAGTG CCGCACAACT CTGCATTGCG CTCTCTGTTG CACTCTTCTT TCCAGCCATC CTGTATGCAG CCGAAGAACG TTCCTACGCA CGTGAAATCA GGAAGTATGT CGATGAAGAT ACGGTTTATT TGTTAGAAAA TACGCAGCAA AACATAACCC TGCCCTCTGA AAGAATCGTG GTTGAAGCTC TTCTTTGTGA AAGTGGCCCA CAGGCAATTG AGCTCTTCCA GAAACAGTTG AGCGATTATC CAGACCCTGC ACTTGATCAA ATCAGTAACT CACGAATAGC CGCCTACAAC CTGGCGCTCA ACAGCACTGC CCCGCTGCCA AAGCTCTCAC GCCCTCTTCT TTCGGCGAAA CCACAAGAGT CTGGTGTGCA GGAAAGTTCG AAGCAACAGC TCGCGTCAAT TTCGAGCAAG ACAAAGGAAG AAATAACTCC TCGCCCATCA CCTGCGCCAG TAAAACCAGC TCAGGAATCA GCACCTCTTC CATCACCTGC GCCAGTAAAA CCAGCTCAGG AATTAGCTCT TCGTCCATCA CCGGCAAAAG TAAAACCGAC TGAAGAATTA GCACTTCGCC CCTCAACTGC GCAAGTAAAA CCGATTCAGC AAATATCGCC TCGTCCATCA CCAACCACAG TAAAACCAAC TCAGGAATCA ACCTTTGCAG GAAGTTCCGG TTTTACCCTG CAATTTGGTT ATTTCGGAAA CAAAGCAAAT GCTGAAAATT TGACCAAAAA GATCTCTCTT TACGAACCGG TAGAAATCGT TGAGCAGGGG CAGTTCTATG GTGTTCGATT GAAAAAGTTA TATGCCACAA AACAAGATGC TGGTGCATTG ATAAAAAAAC TGCCCTTCCC GGCTTTTATT GTTCCAGTAA AAAAGACGCA GCAGTGA
|
Protein sequence | MLSEKRLLRI RKSAAQLCIA LSVALFFPAI LYAAEERSYA REIRKYVDED TVYLLENTQQ NITLPSERIV VEALLCESGP QAIELFQKQL SDYPDPALDQ ISNSRIAAYN LALNSTAPLP KLSRPLLSAK PQESGVQESS KQQLASISSK TKEEITPRPS PAPVKPAQES APLPSPAPVK PAQELALRPS PAKVKPTEEL ALRPSTAQVK PIQQISPRPS PTTVKPTQES TFAGSSGFTL QFGYFGNKAN AENLTKKISL YEPVEIVEQG QFYGVRLKKL YATKQDAGAL IKKLPFPAFI VPVKKTQQ
|
| |