| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1061 |
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| Symbol | |
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| ID | 6462453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1092802 |
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| End bp | 1093953 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642727309 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002017959 |
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| Protein GI | 194336165 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.406887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACGAG AGACTACAAT TGTCGGGCAA TCTCTCCTGA TCTCCCAGCT CAAGCAACTT
GCTCTCCAAG TCGCTCAAAC CGATATCACG GTATTAATAA TTGGAGAAAC GGGATCGGGA
AAAGAGGTTC TGGCACGCTT TATTCATGCA AACAGCCTGC GGGCCGATAA AAGCTTCATC
CCTGTCAATT GCGGCGCAAT TCCCTCCGGT ATTCTTGAAT CGGAACTTTT TGGTCATGAA
AAGGGGGCGT TTACCGGAGC AGTGCAAAGC AGAAAGGGGT ACTTTGAAAG TGCCGACAGG
GGCACTATTT TTCTTGATGA AATCGGTGAA ATGCCACTTG AAACCCAGGT AAAATTTCTC
AGGGTTATTG AGACCGGAGA GTTTCAGCGG GTCGGATCGT CAGAGAGTAT TTACTCTGAT
GCCCGCATCA TTGCTGCTAC CAACAAAAAC ATGTATCAGG CTGTCGCGGA AAAAAACTTT
CGGGAAGATC TTTTTTACCG TCTGCGTAGT GTTGAACTGC AAATCCCGCC ACTACGGGAG
AGAGGACGAG ATATCCTCCT GCTTGCCGAA AATTTTGTTC ATGAATTTGA ACAGAAACAC
AAAATCCTCT TTGAAGGATT CAGCCCGGAT ACGACAGAGA TGCTGATGCG CTATCCCTGG
CCAGGAAACG TCAGAGAGCT CAGAAATCTC ATTGAATCCC TGCTTGTGCT TGAAAAGGGG
AAATATATCA CTTCTGAAAT TCTTGAACGA CATCTGGTGC AGCGAAATCG ATACAAAAGC
CTGGTTCATG ATCCGGCTAA ATCAGAAAAA AACGAGCTTC AGGTGATTTA CAGTACCATG
ATGCAGCTTC GACAGGAGGT CAGTGAAATC CGCCAACTTC TTCAGCATCT TGTGCAGACC
AGAGCGCTCA CTCCACTGTT TCTGCCTGAT GTTTCAGCAA CACTCCCGCA ATTTACCCCT
GTCTTGAAAC CAGCAGTCGA GGAACACATC CATCCTGCAC CACCCAAAGT TCTTCGCTCA
CTTGATGAGA TGGAAAAAAA GTCTATTGCC GAAGCACTTG AATCATGCAA TGGAAACAAG
AGAAAAACAG CTCTGGCACT CGGCATTACA GAACGAACAC TCTATCGCAA AATCAAGGCT
TATGGGCTCT GA
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| Protein sequence | MKRETTIVGQ SLLISQLKQL ALQVAQTDIT VLIIGETGSG KEVLARFIHA NSLRADKSFI
PVNCGAIPSG ILESELFGHE KGAFTGAVQS RKGYFESADR GTIFLDEIGE MPLETQVKFL
RVIETGEFQR VGSSESIYSD ARIIAATNKN MYQAVAEKNF REDLFYRLRS VELQIPPLRE
RGRDILLLAE NFVHEFEQKH KILFEGFSPD TTEMLMRYPW PGNVRELRNL IESLLVLEKG
KYITSEILER HLVQRNRYKS LVHDPAKSEK NELQVIYSTM MQLRQEVSEI RQLLQHLVQT
RALTPLFLPD VSATLPQFTP VLKPAVEEHI HPAPPKVLRS LDEMEKKSIA EALESCNGNK
RKTALALGIT ERTLYRKIKA YGL
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