| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1047 |
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| Symbol | |
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| ID | 6462687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1079289 |
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| End bp | 1082840 |
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| Gene Length | 3552 bp |
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| Protein Length | 1183 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642727296 |
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| Product | putative signal transduction protein with Nacht domain |
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| Protein accession | YP_002017946 |
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| Protein GI | 194336152 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5635] Predicted NTPase (NACHT family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.598608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAAAG CGACAAAGGG ATATCAGGAG GTGCTGAAAA TCACGGGTGA GCTTGATTCG
GCTCTCACCT GGCTGCATAT TTCGGATCTG CATCTCAGCG ACCGGGGACG TTACGACCAG
GAGGTGATTC TTCGTGCGCT TGTTGCATCA GTGAAGCAAT TCCGCGAAGA GGGGCGCGTA
CCGGATTTGA TTGTGGTTAC CGGCGATATT GCCCATAGTG GCAAGGCTGA AGAGTACCGG
CAGGCAACCC TCTTTTTTGA TGACCTGCTT GCCGCTGCCG GGCTTGACAA AAGGCGGCTC
TTCGTGGTAC CCGGCAACCA CGATGTTGAC CGCACGGTGA ACGAATTTTT GCCAAGAACC
CTTGACAGCG ATGCAAGCTC CGACAAGTTT TTTGATCCCG CAGGAGTGGC CATAGCGATC
CAGTTTCAGA AGCTTCAGGC TTACAGCGCA TGGTATAACA GCTATTTTGC CGGTTTTCGC
AGCTTTCCGA CCGACACAAC CTGCAGCACC GTTGAAGTGG TGCAGATCCG GCAGGTCAGG
GTGGCCATGC TTTTGCTGAA CAGCGCTCTT TTCTGCATTG ACGATCAGGA TCATGGCAAG
CTGCTGCTCG GTCGCCGCTG CCTCGACAAG GCGACGAAAG CGCTGCAGGA GCAGGCGGCA
GACCTCAATC TTGCCCTGCT GCACCATCCG CTCGACTGGC TGAGCGCGGT TGAGCGTGCA
AACATCCGGG CCACTCTTGG TGCATCGGTT GACCTGCTCT TGCACGGTCA CTACCATGAG
ACCGACACAG AATGCACGGT GTCGCAGCAT GGCGGTTACC TCAAGCTTGG TGCCGGGGCA
TCATACCAGA CACGCGAGTG GCCTAATTGC GCCATGTATG CCACCGCACA GAGTGGCCGG
GTGACCATCT TTCCGATATG CTACCACGAC AAGCCGCGTG AAGTGTGGGC GCTTGATACC
GCAATCTTTC CGTCGCCCTC CTATATCGGC ACATTTTCTC TCCCGAAACG GGTGAGCCCC
GATGTCAGAG AGGCACAGGC GCTCACGACG CTCGACCGCG ACCATCTTCA TGACTACCAC
GAGGCGCTCA GGAGGGAGCT TGATATCAGC AACCTTCTCG GTACCCATGC GCTCGAAAAT
GTGCCGGTAG GATTGACGGA TACCTTTGTT GCCCTTCGCC TCTCCGATGG CTGGCGTAGC
GACTGTGACC TCAATGTTGG TGAAGCGTGT CAGTCGTCCG AACAGGAACA GGAGCAGAAA
TTCCATGAGC AGATACGCAA GCCGGAGGAG GTGATGCGCC TTGTGTTTGA GCAACAACGG
TTGCTGCTCA TTATTGGCGA CCCCGGTTCC GGCAAGACCA CGCTGCTCAA GCACTATGCC
CTCACCTCTC TTGACGACAG GAAGAGGCTT GGCTTCACTG AGCCGCTGCT CGTGGTTTTT
CTGCCACTCC GTGACCTCAT CGTGGAGAAT GGAGACTATG CGCCGATCTC CCATAATCTC
ATTGCGTGGT CGGCGCTGCA CAATCTTGAC ATTGAAGAGA AGCACCTCTC CCGCTGGCTG
CAACAGCGGC CCACGCTCCT CCTCTTTGAT GGTCTTGATG AAATCAGTGA CCCGCAACAG
CGCATCAGGG CGTGCCGATG GATTGACCGG ATTGTCGCCA GCTTTAAAAA AGCGCAAGTG
GTGGTCACCT CCCGTTCCAC AGGTTACAGG AAGGCAGAGG GGATTGAGCT TGCCTCCCGT
CACACGCGGG CCGACATCAT GGATTTTACC AGTGAGCAGC AGCAGGAGTT TCTTGAGAAA
TGGTTCAGGG CGGCATATCT CGGCGAGCTG AAGCCAGGGA GCGAAACACA GGAGCGGTGG
GAGAAGAGCC AGAAAGAGAA AGCCGAGCGG AAAGCGAAGG ATATTGTGCT CTTTTTGGCC
CAGGAGAAAA ACAGGGGCGT GCAGGCATTG GCCAGAGTGC CCCTGCTGCT TCAGATCATG
GCCATGCTCT GGAAAGATCG GGACTATCTG CCAGCCAGTC GGTTGAAACT CTATGAAGCC
GCCCTGAACT ACATACTCGA TTACCGCGAC CGTCAAAAGG GTCTTGAGCC TCTCCTTCCG
GCAGAAGATG CCCTGCGTGT ACTCGCTCCA GTCTCGCTCT GGATGCAGGA GGTGGTAAAA
CGCGACGAGG TTGAGCGGGG GGCGATGCAG CAGCAGATGC AGATTCAACT CAAGACGCTG
ACCAAGCGCT ACAGCGCAGA GGAGTTTTGC CGGAACCTTG TTGACCGCGC CGGTCTGCTG
GTGGAGTATC GCGACAGGGA GTACCTTTTT CGCCACAAAT CGTTCAGGGA GTACATGGCT
GGTCTGCAGC TCCAGAAAGA GTGGGGCAGG GAGCAGCGCA TGGCCACTTT TGCCGGGTAT
TTCGGCGACG ACTGGTGGAA TGAGCCCTTG CGCTTTTTTA TTGGCCAGGC TGATGCAGCA
ACCTTTGACG CCTTTATGCG CGAGCTTTTC AACTCGCCAG TCAGTGAAGA GATGACGCAG
AAGCAGCAGG ATTTGCTGAC CACTCTCATC GAGGAGGCGC CGCAGATCTG TTTTGATGCA
CTGCGCAGCA AGCTGATGGA GCCAGAGACC ACCCTCAACC GTCAGCGCTA CCTGTTGCAG
TGCCTCAACG CCATTGGCGA GCTGGAGGCC CATAAAGAGG CGCTTGAGGT GGTGGAGCAG
TTCAACCTCT CGGAACTTTC CAAAGAGCGG CCTCTTGTAG CTGGCACTCT CAATGATCCC
CTTGGCGCCG AGTATCTCCT GATCAAGGGC GGAAGCTTCG ACTACTCCCT GACGAAAAAG
CGGGAAACGG TGCCAGACCT CTACGTGGCA AAATTCACGG TGACCAATCG GCTTTTCCGC
CAGTTTATCA GCTTCCTTGA GACAAAAGGG AGTGATGTTG CTGGAAACTT GCTTTTTGAG
AGCTACAAGA AACACTTGTC AGCCCTGGCA GAGAGCATCA AGGAGTTCAG CAGTTGGTTG
CAGCAAGAAA AAGAGTTGTC GAAACGGTTT GCTTCCAGGT ACGATGACGA CAAGCGATTC
AACAAGGATG ATCAGCCGGT GATAGCAACG TGGTATGCTG CCCGTGCTTA TTGTCTCTGG
CTTTCACTGC TTGAAAGCGA CAAGGATGTG TTCTACCGGC TTCCTGCAGA AATGGAGTGG
GAATTTGCTG CTGCAGGTGA GGAGGGGCGT TCCTACCCCT GGCCGAAAGA GCGGGGAGAG
CCAACGCCAA AACTTGCCAA TTATAATTCG AATGAAGGCT CTACAACGCC GGTTGGTCGT
TATCCTGAGG GCGCCACGCC GGAAGGGCTC TTCGATATGG CAGGTAATGT ATGGGAGTGG
ACGGATGATT GGTATGGCGA AAAAGAAGGG TACCGTTCGG TGCGGGGAGG TTCGTATTAT
AGCAGTAAAG CTGATGCTCT GCGCTGCTCC TCCCGGAACG ACGACCTTCC GGGGAACTGG
GGCAGCTACA ATGTGGGTTT TCGAGTGATT CGTTCCAGTC ATTCTTTTCT TCCTGAACAT
CTGATCCTCT GA
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| Protein sequence | MTKATKGYQE VLKITGELDS ALTWLHISDL HLSDRGRYDQ EVILRALVAS VKQFREEGRV
PDLIVVTGDI AHSGKAEEYR QATLFFDDLL AAAGLDKRRL FVVPGNHDVD RTVNEFLPRT
LDSDASSDKF FDPAGVAIAI QFQKLQAYSA WYNSYFAGFR SFPTDTTCST VEVVQIRQVR
VAMLLLNSAL FCIDDQDHGK LLLGRRCLDK ATKALQEQAA DLNLALLHHP LDWLSAVERA
NIRATLGASV DLLLHGHYHE TDTECTVSQH GGYLKLGAGA SYQTREWPNC AMYATAQSGR
VTIFPICYHD KPREVWALDT AIFPSPSYIG TFSLPKRVSP DVREAQALTT LDRDHLHDYH
EALRRELDIS NLLGTHALEN VPVGLTDTFV ALRLSDGWRS DCDLNVGEAC QSSEQEQEQK
FHEQIRKPEE VMRLVFEQQR LLLIIGDPGS GKTTLLKHYA LTSLDDRKRL GFTEPLLVVF
LPLRDLIVEN GDYAPISHNL IAWSALHNLD IEEKHLSRWL QQRPTLLLFD GLDEISDPQQ
RIRACRWIDR IVASFKKAQV VVTSRSTGYR KAEGIELASR HTRADIMDFT SEQQQEFLEK
WFRAAYLGEL KPGSETQERW EKSQKEKAER KAKDIVLFLA QEKNRGVQAL ARVPLLLQIM
AMLWKDRDYL PASRLKLYEA ALNYILDYRD RQKGLEPLLP AEDALRVLAP VSLWMQEVVK
RDEVERGAMQ QQMQIQLKTL TKRYSAEEFC RNLVDRAGLL VEYRDREYLF RHKSFREYMA
GLQLQKEWGR EQRMATFAGY FGDDWWNEPL RFFIGQADAA TFDAFMRELF NSPVSEEMTQ
KQQDLLTTLI EEAPQICFDA LRSKLMEPET TLNRQRYLLQ CLNAIGELEA HKEALEVVEQ
FNLSELSKER PLVAGTLNDP LGAEYLLIKG GSFDYSLTKK RETVPDLYVA KFTVTNRLFR
QFISFLETKG SDVAGNLLFE SYKKHLSALA ESIKEFSSWL QQEKELSKRF ASRYDDDKRF
NKDDQPVIAT WYAARAYCLW LSLLESDKDV FYRLPAEMEW EFAAAGEEGR SYPWPKERGE
PTPKLANYNS NEGSTTPVGR YPEGATPEGL FDMAGNVWEW TDDWYGEKEG YRSVRGGSYY
SSKADALRCS SRNDDLPGNW GSYNVGFRVI RSSHSFLPEH LIL
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