Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1045 |
Symbol | |
ID | 6462959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1077510 |
End bp | 1077923 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642727294 |
Product | peptidyl-tRNA hydrolase domain protein |
Protein accession | YP_002017944 |
Protein GI | 194336150 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1186] Protein chain release factor B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.290835 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCAGA TTACCGAAAC CATTGCCATC CCTGATGAGG AAATTGAGCT GCAGACCATG CGTGCGCAGG GGGCGGGCGG CCAGAATGTC AACAAGGTTG AAACCGCTGT TCACCTGCGT TTTGACGTCA AGGCATCGTC GCTTCCTGAG GATTTCCGTG AAAAGTTGCT ACTTCTGAAG GATCACCGCA TGACAAAAGA TGGGGTGATC ATCATCAAGG CGCAACGGTA CCGATCACAG GAGAAGAACC GGACGGATGC CCTGATGCGG CTGCAGGCGT TGCTTCAGCA TGTTGCTCTG CCGGTTAAAA AACGCAAGCC TACTTCCCCC ACCAAAAGCT CAAAAGAGAG GCGTATTGAG AGCAAGGTAA AGCGGGGAGC AGTAAAGGCG ACAAGAGGGC CGATTGATTA TTGA
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Protein sequence | MLQITETIAI PDEEIELQTM RAQGAGGQNV NKVETAVHLR FDVKASSLPE DFREKLLLLK DHRMTKDGVI IIKAQRYRSQ EKNRTDALMR LQALLQHVAL PVKKRKPTSP TKSSKERRIE SKVKRGAVKA TRGPIDY
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