Gene Ppha_1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1045 
Symbol 
ID6462959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1077510 
End bp1077923 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content52% 
IMG OID642727294 
Productpeptidyl-tRNA hydrolase domain protein 
Protein accessionYP_002017944 
Protein GI194336150 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.290835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCAGA TTACCGAAAC CATTGCCATC CCTGATGAGG AAATTGAGCT GCAGACCATG 
CGTGCGCAGG GGGCGGGCGG CCAGAATGTC AACAAGGTTG AAACCGCTGT TCACCTGCGT
TTTGACGTCA AGGCATCGTC GCTTCCTGAG GATTTCCGTG AAAAGTTGCT ACTTCTGAAG
GATCACCGCA TGACAAAAGA TGGGGTGATC ATCATCAAGG CGCAACGGTA CCGATCACAG
GAGAAGAACC GGACGGATGC CCTGATGCGG CTGCAGGCGT TGCTTCAGCA TGTTGCTCTG
CCGGTTAAAA AACGCAAGCC TACTTCCCCC ACCAAAAGCT CAAAAGAGAG GCGTATTGAG
AGCAAGGTAA AGCGGGGAGC AGTAAAGGCG ACAAGAGGGC CGATTGATTA TTGA
 
Protein sequence
MLQITETIAI PDEEIELQTM RAQGAGGQNV NKVETAVHLR FDVKASSLPE DFREKLLLLK 
DHRMTKDGVI IIKAQRYRSQ EKNRTDALMR LQALLQHVAL PVKKRKPTSP TKSSKERRIE
SKVKRGAVKA TRGPIDY