Gene Ppha_1034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1034 
Symbol 
ID6462685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1069491 
End bp1070915 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content58% 
IMG OID642727285 
ProductRadical SAM domain protein 
Protein accessionYP_002017935 
Protein GI194336141 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGTTG CAGGGGAGAA GAGGGTTCTG CTCATCTTTA TTCAGGCCGA CAGCGGCGTT 
GACGGAGCGG CTTCACTCGA CAGCGCCTCA GCCAAACGAA GCATTTTCAC CTCACTGAAA
GACTCTGCCC TGAGCAACAT CATCCGGCGG GCGCAATTTG CCATTCCTCC CCTCGCCCTG
ATGATTCTCA GTTCACAGGT TGTGCCGGGA GTGAGCCAGA CCATCTGCGA CCTCCGCTTC
GAAAAGCTCC CCCTCGACCA GCACTGGGAT ATGGCAGGTA TCAGCGTCCA GACCGGAGCG
GTCAAGCCTG CCTTTGAGCT TGCCCATGCG CTCCGCTCCC GAGGAATCAA GGTAGTGCTT
GGCGGCCCTT ACGTCACCAT CTTCCCCGAG CAGTGCCGCG ACCATGCCGA TGCTTTGGTG
ATAGGGGAGG CCGACGACAT CTGGCGCGAG GTGCAGGAGG ATCTGCTTCG CGGCAGCCTG
AAAGCAGAGT ACCGGGTTGA GAGCTTTCCC GACCTCTCCA TTGAGCGCAC CGTCAGTAAA
AGTGCGCTCG ACATCAAGAG CTACTTCACC ACCAACGTCG TGCAGACCAC CCGGGGCTGC
CCCTACAGTT GCGACTTCTG CAACGTCCAC GTCATGAACG GCCACCGACT GCGTCACCGG
AGCATTCCAG CCGTCCTCAG GGAGGTTGAA ACGTTCCTTA AAGAGGACAA GCGGATCTTC
TTCTTCCTCG ACGACACCAT TAACGCCGAC GAAACGTACG CTGAACAACT CTTCCGCGAA
CTCGAACCTT TCAGGATCAG TTGGGTAGGC CAGGCCACCA CAGCCCTCGG TGAAAAGCCT
CGACTGCTTG ACGCCTTCGC CCGCTCAGGC TGCGGCGCTC TCTTGGTCGG CATCGAAAGC
CTCGATGACG GCAGCAATCA CGCCCACAAA AAGTTCCATA ACCCCTCCAA CCGTCAGGTG
GAGTGCATCA AAAACATACG AAAAGCCGGT ATCTGCGTCT ACGGCAGTTT CATTTACGGC
CTCGACGAAG ACAGCCTTGA ACTCCCCGCA AAACTTGAAG CCTTCATCGA AGAGACCGGC
ATCGACGTAC CCGGCATCAA CCTCCTGCGC CCCATTCCCG GCACCGGTGT CTTCGACCGA
CTTGCACTCG AAGGCCGCCT GCTCCACTCC CCGCACGATC ACGACGCCTT CAAATTCTCA
TGGGGCCAGG AGATGCTCTA CAAACCCCTG CGCATACCAC TGCAAGAGTT CATCCCAAGC
TACACCGCCC TCACCAAACG GGTCTTTACC GTCCAGAACG CCCTAAAGCG AGCCGCCCGA
GCCCCCCGCC TCCGCTCCGC CGTGCTCATG TTCAATTTGT TATATGTGCA CATGTACGGC
ATAGCCCGCA AAGATTTAAC CCGCCAATTG CACGAATTGG ATTAA
 
Protein sequence
MAVAGEKRVL LIFIQADSGV DGAASLDSAS AKRSIFTSLK DSALSNIIRR AQFAIPPLAL 
MILSSQVVPG VSQTICDLRF EKLPLDQHWD MAGISVQTGA VKPAFELAHA LRSRGIKVVL
GGPYVTIFPE QCRDHADALV IGEADDIWRE VQEDLLRGSL KAEYRVESFP DLSIERTVSK
SALDIKSYFT TNVVQTTRGC PYSCDFCNVH VMNGHRLRHR SIPAVLREVE TFLKEDKRIF
FFLDDTINAD ETYAEQLFRE LEPFRISWVG QATTALGEKP RLLDAFARSG CGALLVGIES
LDDGSNHAHK KFHNPSNRQV ECIKNIRKAG ICVYGSFIYG LDEDSLELPA KLEAFIEETG
IDVPGINLLR PIPGTGVFDR LALEGRLLHS PHDHDAFKFS WGQEMLYKPL RIPLQEFIPS
YTALTKRVFT VQNALKRAAR APRLRSAVLM FNLLYVHMYG IARKDLTRQL HELD