Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1034 |
Symbol | |
ID | 6462685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1069491 |
End bp | 1070915 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642727285 |
Product | Radical SAM domain protein |
Protein accession | YP_002017935 |
Protein GI | 194336141 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGTTG CAGGGGAGAA GAGGGTTCTG CTCATCTTTA TTCAGGCCGA CAGCGGCGTT GACGGAGCGG CTTCACTCGA CAGCGCCTCA GCCAAACGAA GCATTTTCAC CTCACTGAAA GACTCTGCCC TGAGCAACAT CATCCGGCGG GCGCAATTTG CCATTCCTCC CCTCGCCCTG ATGATTCTCA GTTCACAGGT TGTGCCGGGA GTGAGCCAGA CCATCTGCGA CCTCCGCTTC GAAAAGCTCC CCCTCGACCA GCACTGGGAT ATGGCAGGTA TCAGCGTCCA GACCGGAGCG GTCAAGCCTG CCTTTGAGCT TGCCCATGCG CTCCGCTCCC GAGGAATCAA GGTAGTGCTT GGCGGCCCTT ACGTCACCAT CTTCCCCGAG CAGTGCCGCG ACCATGCCGA TGCTTTGGTG ATAGGGGAGG CCGACGACAT CTGGCGCGAG GTGCAGGAGG ATCTGCTTCG CGGCAGCCTG AAAGCAGAGT ACCGGGTTGA GAGCTTTCCC GACCTCTCCA TTGAGCGCAC CGTCAGTAAA AGTGCGCTCG ACATCAAGAG CTACTTCACC ACCAACGTCG TGCAGACCAC CCGGGGCTGC CCCTACAGTT GCGACTTCTG CAACGTCCAC GTCATGAACG GCCACCGACT GCGTCACCGG AGCATTCCAG CCGTCCTCAG GGAGGTTGAA ACGTTCCTTA AAGAGGACAA GCGGATCTTC TTCTTCCTCG ACGACACCAT TAACGCCGAC GAAACGTACG CTGAACAACT CTTCCGCGAA CTCGAACCTT TCAGGATCAG TTGGGTAGGC CAGGCCACCA CAGCCCTCGG TGAAAAGCCT CGACTGCTTG ACGCCTTCGC CCGCTCAGGC TGCGGCGCTC TCTTGGTCGG CATCGAAAGC CTCGATGACG GCAGCAATCA CGCCCACAAA AAGTTCCATA ACCCCTCCAA CCGTCAGGTG GAGTGCATCA AAAACATACG AAAAGCCGGT ATCTGCGTCT ACGGCAGTTT CATTTACGGC CTCGACGAAG ACAGCCTTGA ACTCCCCGCA AAACTTGAAG CCTTCATCGA AGAGACCGGC ATCGACGTAC CCGGCATCAA CCTCCTGCGC CCCATTCCCG GCACCGGTGT CTTCGACCGA CTTGCACTCG AAGGCCGCCT GCTCCACTCC CCGCACGATC ACGACGCCTT CAAATTCTCA TGGGGCCAGG AGATGCTCTA CAAACCCCTG CGCATACCAC TGCAAGAGTT CATCCCAAGC TACACCGCCC TCACCAAACG GGTCTTTACC GTCCAGAACG CCCTAAAGCG AGCCGCCCGA GCCCCCCGCC TCCGCTCCGC CGTGCTCATG TTCAATTTGT TATATGTGCA CATGTACGGC ATAGCCCGCA AAGATTTAAC CCGCCAATTG CACGAATTGG ATTAA
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Protein sequence | MAVAGEKRVL LIFIQADSGV DGAASLDSAS AKRSIFTSLK DSALSNIIRR AQFAIPPLAL MILSSQVVPG VSQTICDLRF EKLPLDQHWD MAGISVQTGA VKPAFELAHA LRSRGIKVVL GGPYVTIFPE QCRDHADALV IGEADDIWRE VQEDLLRGSL KAEYRVESFP DLSIERTVSK SALDIKSYFT TNVVQTTRGC PYSCDFCNVH VMNGHRLRHR SIPAVLREVE TFLKEDKRIF FFLDDTINAD ETYAEQLFRE LEPFRISWVG QATTALGEKP RLLDAFARSG CGALLVGIES LDDGSNHAHK KFHNPSNRQV ECIKNIRKAG ICVYGSFIYG LDEDSLELPA KLEAFIEETG IDVPGINLLR PIPGTGVFDR LALEGRLLHS PHDHDAFKFS WGQEMLYKPL RIPLQEFIPS YTALTKRVFT VQNALKRAAR APRLRSAVLM FNLLYVHMYG IARKDLTRQL HELD
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