| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1033 |
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| Symbol | |
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| ID | 6462655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1066873 |
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| End bp | 1069491 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642727284 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_002017934 |
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| Protein GI | 194336140 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.256802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAG CCGAGGGTAC CATACAGAAA GAGCATTCTC CCATGATGCG GCAGTATCTT
GAGGTTAAGG AGCGATATCC TGATTTTTTA CTGCTTTTCA GGGTGGGTGA TTTTTATGAA
ACCTTTTTTG ACGATGCAGT CACGGTTTCA GCCGCGCTGA ATATTGTGCT GACCAAACGC
ACAGCGGAAA TCCCCATGGC AGGCTTCCCG CATCATGCAA GTGAAGGATA TATAGCCAAA
CTGGTCAAAA AAGGGTTCAA GGTTGCGGTT TGCGACCAGG TTGAAGATCC TGCGGATGCG
AAGGGGATTG TTCGCCGGGA AATCACCGAT ATCATCACTC CTGGCATTAC CTACAGCGAC
AAGGTGCTTG ACGACTGCCA TAACAACTAT CTTTGCGCTG TTGCCTTTCT CAAGGAGGGG
AGGACGCTTC TTGCCGGTGT CGCCTTTATT GATGTTACCA CGGCTGAATT CAAAATTGCT
TCGCTTCATA TCGAAGAGCT CAAGGATTTT GTTCTTTCAC TTCACCCCTC GGAAGTTCTT
GTCTCCTCTG CCGAGAAGGA GCGGTCGGAA CTCCTGAAAA AGGCACTTTC GTCGGAGACG
CTTGTTACAG AACTTGATTC ATGGATGTTC AGCGAAGATC AGGCGCAGGA GGTTCTTTCA
CGGCAGTTCA AAACCCACTC CCTGAAAGGC TTTGGCATTG ACGGCAACCG GGCGGGCAGG
GTAGCGGCTG CTGTTATTCT CCAGTATATC GAAGAGACCC GCCAGAATCG TCTGCACTAC
ATTACCCGGA TAGGGGAGTT GCACAGCGCC GAGTATATGA CCCTCGACCT GCAGACCAAG
AGAAATCTTG AAATTATCTC ATCCATGCAG GATGGCACAC AGAATGGAAG TCTGCTTCAG
GTGATCGACC GCACCCGCAA CCCGATGGGG GCAAGGCTTC TGCGTCGCTG GCTGCAGAGA
CCGCTGAAGC GGGTTGATGA GATCCGGATG CGGCTTGATG CTGTGGGAGA ACTCTCCGAA
TGCCGCGAAA TGCGGGAGGC TCTTTCCGAA CAATTATCCG CCATCAATGA TCTGGAGCGC
TGCCTTGCCC GTATTGCCAC GTTCCGTACC ATCCCAAGAG AGGTTCGTCA GCTTGGTTTA
TCACTCTCGG CTATTCCGAT TCTTCAGGAA CTGCTTCGTG AGGCAGGCTC GGCCCGGCTC
ATCGCTCTCG CGTCCAATCT GAAACCGCTC CCGGAACTTG CGGCATCTAT TGAACAGGCA
ATTGACCCTG AATCGGGCGC ATCCATGCGT GATGGCGGCT ACATCCGCAC CGGATATCAC
GCAGAACTTG ATGAACTCCG CACCATTGCC TCGACCGCTA AAGATCGTCT TCTACAGATT
CAGCAGGAGG AGAGGGCAGC CACCACCATC TCATCGCTCA AGGTCAGTTT CAACAAGGTC
TTCGGTTACT ATATCGAAAT CAGCCGAGCC AACATCGACA AGGTACCGGC CTATTATGAA
AAAAAACAGA CCCTTGTCAA TGCCGAGCGC TATACCATTC CAGCCCTGAA AGAGTATGAA
GAGAAGATTC TCAACTCCGA AGAGAAAAGC TTTCTACTCG AAGCGCAGCT CTTTCACGAC
CTCTGCCTGC TTATTGCCGA GAACGCCTCC GCGATACAGG AAAATGCCGC ACTGATTGCC
GAAATCGACT CTCTCTGCTC CTTTGCTCTC TGCGCCTCTG AATATGGCTA CTGCAAACCG
GAGATCATGA CGCACGAAAA GCTTGCTATC GTTGGTGGCC GTCACCCGGT ACTCGAAAGG
ATGATGAGCG CCGAGGATCC CTATGTGCCC AATGACTGCC ACTTCGATGA AAAACAGCAG
ATGCTCATCA TAACCGGCCC CAACATGGCC GGAAAAAGCT CCTTTCTGCG TCAGACCGGC
CTGATTGTTC TGCTCGCACA GGCAGGCAGC TTCGTTCCGG CTGAACGGGC GGAAATCGGG
CTTGTTGACC GAATCTTTAC ACGGGTCGGC GCCTCCGACA ACCTCGCTTC CGGCGAAAGC
ACCTTTCTGG TCGAAATGAA CGAAGCGGCA AGCATTCTTA ACAACGCCAC ATCAAAAAGC
CTGCTGCTGC TCGATGAAAT TGGCCGGGGA ACCAGCACCT TTGATGGGAT GTCGATTGCC
TGGTCGATGA GCGAATATAT CTGCCGTTCA ATCGGGGCAA GAACCCTTTT TGCAACCCAC
TATCACGAAC TTGCCGAACT GGAAAGTCGT CTGCCCGGGG TGGTAAACTA CAACGCAACC
GTCGTCGAAA CCGCCGATAG CGTCATCTTT CTGCGCAAGA TTATTCGCGG CTCCACCGAC
AACAGCTATG GCATTGAAGT GGCCAAAATG GCCGGAATGC CTGCGGAGGT GATTTCGCGG
GCCAAAGAGA TTCTTGCGGG GATGGAGAAG CGCGACATTC AAATTCCCCA AAACCGGCCA
CCAAAAATAA AAAGTATGCA GATCAGCCTT TTTGAAGAGT CCGACAACCA GCTTCGCAAC
GCGGTAGAGG CTCTTGACCT CGACCGCTTA ACTCCTCTCG ATGCCCTGCT GGAGCTAAAA
AAGCTGCAGG AGCTGGCACG CAACGGGGGT GGCTATTGA
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| Protein sequence | MSKAEGTIQK EHSPMMRQYL EVKERYPDFL LLFRVGDFYE TFFDDAVTVS AALNIVLTKR
TAEIPMAGFP HHASEGYIAK LVKKGFKVAV CDQVEDPADA KGIVRREITD IITPGITYSD
KVLDDCHNNY LCAVAFLKEG RTLLAGVAFI DVTTAEFKIA SLHIEELKDF VLSLHPSEVL
VSSAEKERSE LLKKALSSET LVTELDSWMF SEDQAQEVLS RQFKTHSLKG FGIDGNRAGR
VAAAVILQYI EETRQNRLHY ITRIGELHSA EYMTLDLQTK RNLEIISSMQ DGTQNGSLLQ
VIDRTRNPMG ARLLRRWLQR PLKRVDEIRM RLDAVGELSE CREMREALSE QLSAINDLER
CLARIATFRT IPREVRQLGL SLSAIPILQE LLREAGSARL IALASNLKPL PELAASIEQA
IDPESGASMR DGGYIRTGYH AELDELRTIA STAKDRLLQI QQEERAATTI SSLKVSFNKV
FGYYIEISRA NIDKVPAYYE KKQTLVNAER YTIPALKEYE EKILNSEEKS FLLEAQLFHD
LCLLIAENAS AIQENAALIA EIDSLCSFAL CASEYGYCKP EIMTHEKLAI VGGRHPVLER
MMSAEDPYVP NDCHFDEKQQ MLIITGPNMA GKSSFLRQTG LIVLLAQAGS FVPAERAEIG
LVDRIFTRVG ASDNLASGES TFLVEMNEAA SILNNATSKS LLLLDEIGRG TSTFDGMSIA
WSMSEYICRS IGARTLFATH YHELAELESR LPGVVNYNAT VVETADSVIF LRKIIRGSTD
NSYGIEVAKM AGMPAEVISR AKEILAGMEK RDIQIPQNRP PKIKSMQISL FEESDNQLRN
AVEALDLDRL TPLDALLELK KLQELARNGG GY
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