Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1028 |
Symbol | |
ID | 6461451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1063372 |
End bp | 1064421 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642727279 |
Product | Agmatine deiminase |
Protein accession | YP_002017929 |
Protein GI | 194336135 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2957] Peptidylarginine deiminase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.262442 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAGT TGAGTTATTT CATGCCCCCT GAGTGGGCTT TTCATAAGGC GACCTGGCTC TCCTGGCCTC ACAGGCTTGA GACCTGGCCA GGCAAGTTTG AGCCTATTCC TGCCGTCTTT GTAGAAATTG TATCCTGGCT GAGCTCTTCC GAGGAGGTGC ATATTAACGT TCTTGATGAA GCGATGGAGC TGCAGGTGCT CGCCTTGTTT CGTAATGCAG ACCATCCCCA ACTGCAGATG AATCGCCTTT TTTTTTACCA GATACCGACC AATGATGCCT GGTGCAGGGA TCATGGGCCG AACTTTGTTT TCCGTCAGAG AGAGGGCAGA AGTGAAAAAA TTATTTTGAA CTGGGAGTAT AATGCCTGGG GTGAAAAATA TACATCCTAT GAGGCCGATA ATGCGGTTCC GGAAAAAATT GCTTCCCTGC AGCACTTGCC GCTTGTTTCA CCTGCGATGG TTCTTGAGGG TGGCTCAATT GATGTCAACG GAAGGGGGCT GCTGCTGACC AGTGAAGCCT GCCTTCTGAA TCCAAACCGC AATCCTGCAA TGAGTCGCGA GCAGATTGAG CAGGAACTCC ATCACTATCT TGGCGTTGAA AAAGTTCTCT GGCTTGGTGA TGGTATTGTT GGTGATGACA CCGACGGTCA TGTTGACGAT ATGGCCCGTT TTGTCAATGA GACAACCGTG GTGATTGCTG TTGAGGATGA TCCATCGGAT GTGAATTATG AAGCGTTGCA GGAGAACTAC ACGAGACTGA AGAGCTTTAC CGACCTTGGT GGTCATCCGC TCACCGTGGT TAAACTACCG ATGCCATTCC CACTCTCTTT TGAAGGGTTT CGTCTGCCGG CAAGCTATGC CAATTTCTAT ATAGCCAATA CGGTGGTGCT TGTTCCGACC TATAGATGTC CGCAGGATCA GAAAGCCATA GATATCCTGC AGGAATTTTT CCCTGACCGG CGGGTTGTTG GTATCGATTG TTCCGATCTT GTATGGGGCC TCGGCGCCAT TCATTGCATT ACTCACGAAG AGCCGGCATG TGCTGAGTAA
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Protein sequence | MTELSYFMPP EWAFHKATWL SWPHRLETWP GKFEPIPAVF VEIVSWLSSS EEVHINVLDE AMELQVLALF RNADHPQLQM NRLFFYQIPT NDAWCRDHGP NFVFRQREGR SEKIILNWEY NAWGEKYTSY EADNAVPEKI ASLQHLPLVS PAMVLEGGSI DVNGRGLLLT SEACLLNPNR NPAMSREQIE QELHHYLGVE KVLWLGDGIV GDDTDGHVDD MARFVNETTV VIAVEDDPSD VNYEALQENY TRLKSFTDLG GHPLTVVKLP MPFPLSFEGF RLPASYANFY IANTVVLVPT YRCPQDQKAI DILQEFFPDR RVVGIDCSDL VWGLGAIHCI THEEPACAE
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