| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1027 |
|---|
| Symbol | |
|---|
| ID | 6463456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 1062098 |
|---|
| End bp | 1063354 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642727278 |
|---|
| Product | Ste24 endopeptidase |
|---|
| Protein accession | YP_002017928 |
|---|
| Protein GI | 194336134 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.275496 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTAT TTGGTGCGGT CGTTTTTTTT ACGCTGCTTC TTACTTTTTT TGTTAAACTG
GTTTCGGAAC TGTTGAATCT CAAGGCCTCT GAAGCCGGAG TGCCTGATGA GTTCATCGAA
CTGTTTGATG AGGAGGCTTA CCGGAAATCA CGGGATTATC TGAGCGTTTC AACCCGTTTT
TCGTTATTTG CTGCGGCGGT TGATCTCTCT TTTCTTCTGC TTTTCTGGTT TGCGGGCGGC
TTTAATCTCC TCGACCAGTT CCTGAGAGGA TACGGTTATA GTCCAATCGT TTGCGGTGTG
CTCTATATCG GAGCCTTGCT GCTGATGCAG ACAGTGATTG ATCTTCCCTT CAGTCTTTAC
AAAACCTTTG TTATTGAGGC GAAATTTGGT TTCAATAAAA CGACACCAGC GGTGTTTGTG
GCTGATTTGT TGAAAACCAT TCTCCTCTCA CTGCTTCTTG GCATCCCTTT GCTTGCTGCA
GTTCTCTGGT TTTTTGAGAC AGCAGGTTCG ATGGCCTGGC TCCTGGCCTG GGGCGGGATT
ACGATGGTCT CTCTCTTGCT CCAGTATATT GCCCCGACAT GGATTATGCC CTTGTTCAAT
AAGTTTGTTC CTCTTGAAGA GGGCGACCTT AAGAGTGCGA TCATGCAGTA TGCGGCTAAA
GTAGAGTTTC CGCTTTCCGG TATTTTTGTT CTTGATGGAT CAAAGCGCTC GGCAAAGGCA
AATGCCTTTT TTACCGGCTT CGGCAAACGC AAAAGAATTG CCCTTTTCGA TACCTTGATT
GAGGCTCATC CTGTTCATGA ACTGGTCGCA GTTCTTGCTC ACGAAATTGG CCATTTCAAG
AAAAAGCATA TCATCGTCAA TCTGGTGCTA AGTTTTTGCA ATCTTGGTGC GCTGTTTTTT
CTTCTCTCTC TTGTTATGAA TAACCGCTCC CTTTTTGATG CATTTTTCAT GAAGGATCTC
TCTGTCTATG GCAGCCTGAT CTTTTTTTCG CTGCTCTATA CTCCCGTGGA GTGGATACTT
TCTCTTCTTC TCCAGCTTCT TTCACGAAAA CATGAGTACG AGGCTGACGC CTATGCGGTA
TCGACCTTTG AGCGGGGAAC GGCCCTGGCC GATGCTCTTA AAAAGTTGTC ACGCAACAAT
CTTTCAAATT TGACACCACA CCCGTTCTAC GTTTTTCTCA ATTACTCCCA TCCCCCGGTA
CTACAGCGTA TCATGCGTAT CAGAGAGTAT GCTGCCGATC GTGATGCAAA TTCCTGA
|
|---|
| Protein sequence | MNLFGAVVFF TLLLTFFVKL VSELLNLKAS EAGVPDEFIE LFDEEAYRKS RDYLSVSTRF
SLFAAAVDLS FLLLFWFAGG FNLLDQFLRG YGYSPIVCGV LYIGALLLMQ TVIDLPFSLY
KTFVIEAKFG FNKTTPAVFV ADLLKTILLS LLLGIPLLAA VLWFFETAGS MAWLLAWGGI
TMVSLLLQYI APTWIMPLFN KFVPLEEGDL KSAIMQYAAK VEFPLSGIFV LDGSKRSAKA
NAFFTGFGKR KRIALFDTLI EAHPVHELVA VLAHEIGHFK KKHIIVNLVL SFCNLGALFF
LLSLVMNNRS LFDAFFMKDL SVYGSLIFFS LLYTPVEWIL SLLLQLLSRK HEYEADAYAV
STFERGTALA DALKKLSRNN LSNLTPHPFY VFLNYSHPPV LQRIMRIREY AADRDANS
|
|---|
| |