Gene Ppha_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1025 
Symbol 
ID6461481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp1060242 
End bp1061156 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content51% 
IMG OID642727276 
Product1,4-dihydroxy-2-naphthoate octaprenyltransferase 
Protein accessionYP_002017926 
Protein GI194336132 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID[TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.738758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCAGA CAACGGTTAA GAGGGCACAG CCAACATCAC TACAGGCGTG GATGCTTGCG 
ATTCGTCCAA AAACCCTTCC TGCGGGTGCG ATGCCGGTGG TTCTTGGTTC CGCCCTTGCT 
GCCGCTGATG GTCAGTTTCG CCCTTTTCCG GCTCTTGTTG CCCTGATTTG TGCGCTTGGC 
ATCCAGGTAG CTACCAATTT TATCAATGAG ATCTATGATT TTCGCAAGGG AGCTGATACC 
GCCGAACGGC TTGGTCCGAC AAGAACGGTT GCCGCTGGTA TCATCAGCGA AAAAAAGATG 
ATTACGGTAT CAGCTTCACT GGCTGGGGCT GTTTTTCTCC TTGGCCTCTA TCTCGTCTCC 
ATTGCAGGTT GGCCGATTCT CGTCATTGGT CTGCTCTCAC TTCTTTTTGC CTGGGGTTAT 
ACAGGAGGCC CCTATCCGAT AGCCTATTCC GGCCTCGGTG ACTTTTTTGT TTTTCTCTTT 
TTCGGGCTGG TTGCTGTCGG AGGTACCTAC TATGTTCAAG CTCAAACTCT TACCTTGCCG 
ATCCTTCTCG CAGCGGTAGC TCCAGGGGCG TTTTCGGTCA ATATTCTTCT TGTAAATAAT 
ATCCGCGATA TTGTTACTGA CCGCAAGGTT GGGAAAATGA CCCTTCCGGC GCGTATTGGC 
GGTGATTGGG CGCGCAGGCT TTATATCGCC TTGACGGTTC TTGCCTATCT TGTTCCTGCA 
CTGCTCTGGC TGAACCACTA TTCGCCCTGG GTTCTGCTTT CGCTATTCTC AGCTCCACTT 
GCCTTCATGA TGATCAGGAG GCTCTATGCG AGCGAGGGCA AAGAGTTGAA TCAGGTTCTG 
GCCGGTACGG GAAAGTTGAT GACCCTTCAC GGGCTGCTGT TTGCGGCAGG TCTTCTTGTT 
CCCTTATTTC AATAA
 
Protein sequence
MHQTTVKRAQ PTSLQAWMLA IRPKTLPAGA MPVVLGSALA AADGQFRPFP ALVALICALG 
IQVATNFINE IYDFRKGADT AERLGPTRTV AAGIISEKKM ITVSASLAGA VFLLGLYLVS 
IAGWPILVIG LLSLLFAWGY TGGPYPIAYS GLGDFFVFLF FGLVAVGGTY YVQAQTLTLP 
ILLAAVAPGA FSVNILLVNN IRDIVTDRKV GKMTLPARIG GDWARRLYIA LTVLAYLVPA 
LLWLNHYSPW VLLSLFSAPL AFMMIRRLYA SEGKELNQVL AGTGKLMTLH GLLFAAGLLV 
PLFQ