| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1020 |
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| Symbol | |
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| ID | 6461292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1055355 |
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| End bp | 1056533 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642727271 |
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| Product | putative two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_002017921 |
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| Protein GI | 194336127 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCTCTA CCATACTCGT CATTAGCGAT AGACAACGAA GGGAGCCCTG CTGGAAAGAA
AGCAAAGAGC AACGTCAGGT CAAATTGCTT TTCGCAGGTT CCGTAGCAGA TGCGCAAGAG
TGGATTGCTG GAGAGAGTGT TGATCTGACA CTTATTGCCC TGAAGGGCCC GGATGATGAA
ACATTTGCAC TTGTCCGCCA ATCACTTGAA AAAAATCAAG AGACAAGAGT CATGTTTTTC
TCTAATGATA AGGAGTTAGA CGACACACTG AGCGCTCTTG CAAAATTCCC GCCAGGAGAA
CTCAAAAAAC TCTTTTCAAC CAGGGCGATT GCTGGCGCGA CAAAGACAGC GCCGTTTACA
CACCCGGAGA GAATCGGAAC AGCCTCATCA CATGAAAGCA CAAGCTTCAA CGAGCATGAA
CTTATTGGTA ATACGACCGA AATAGAGCGA CTCAAGGCCC TTGTGCGTAA AATAGCACCC
GTCGGTAACG CCATCATGCT TCAGGGAGAG ACAGGAGCTG GTAAAAAGGT GCTGGCCCGT
ACCATACACA ACCACAGTTC AAGAAAAAAC GAGGTTTTCA TCCCTGTAGA TTGTTCTGCA
ATCAATAAAA GCAATGTTGA GGAGAAATTA TTTGGTTGCA ACGCAAAGGC GTCTGCCGGA
GCTGCTCACC GTACTCTCGG TCTTGTCCGA TCGGCTGATC AAGGAACCCT TTTTCTTGAC
AGAATTACAG AACTGCCGAT AAGCGTACAA ACAAAAATAG TACGCACCAT AAAGGAACGT
ACCGTTAAAC CGGTCGGTTC GTCCACAATC TATCCCGTCG ATATCAGAAT CATTGCCTCT
TCCAACCGCA ATCTTGTTGA AAGTGTTAAA AACGGAACCT TCTGCCCGGA CCTCTATGAG
CACCTGAATA CCATTACACT CTATGCTCCC CCATTACGCG AGCGTTGTGC CGATATTCCT
CTCCTGTGCA CGCACTTTAT CAACAAGCTT TTCTATGACG GCTATCCCAA AAAACAACTT
TCCGACAGCG CCATGGCTGC TCTATGCAAT CATGAGTGGC CAGGGAACAT ACGCGAACTG
GAAAACGTTA TCAGATGTGC TCTTATTCTT TCGGATGGGA GGCAGGTAGA ACTCCACGAC
CTCTCACTTT CCGACAAAAA CAATGAACAA CAGCTCTGA
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| Protein sequence | MCSTILVISD RQRREPCWKE SKEQRQVKLL FAGSVADAQE WIAGESVDLT LIALKGPDDE
TFALVRQSLE KNQETRVMFF SNDKELDDTL SALAKFPPGE LKKLFSTRAI AGATKTAPFT
HPERIGTASS HESTSFNEHE LIGNTTEIER LKALVRKIAP VGNAIMLQGE TGAGKKVLAR
TIHNHSSRKN EVFIPVDCSA INKSNVEEKL FGCNAKASAG AAHRTLGLVR SADQGTLFLD
RITELPISVQ TKIVRTIKER TVKPVGSSTI YPVDIRIIAS SNRNLVESVK NGTFCPDLYE
HLNTITLYAP PLRERCADIP LLCTHFINKL FYDGYPKKQL SDSAMAALCN HEWPGNIREL
ENVIRCALIL SDGRQVELHD LSLSDKNNEQ QL
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