| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0998 |
|---|
| Symbol | |
|---|
| ID | 6462250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1033109 |
|---|
| End bp | 1033864 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642727249 |
|---|
| Product | imidazole glycerol phosphate synthase subunit HisF |
|---|
| Protein accession | YP_002017899 |
|---|
| Protein GI | 194336105 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGCCA AACGGATCAT CCCCTGCCTC GATGTTCGAG ATGGCAGGGT GGTAAAGGGA
ATAAACTTTG AAGGGCTGAG AGATGCAGGC TCCATCCTTG AACAGGCACG CTTTTACAAT
AATGAACTGG CCGATGAACT TGTCTTCCTT GATATTTCAG CATCACTCGA GTCACGCAAA
ACGACGCTTG AAGAGGTACT GAAAGTTTCC GGAGAGATCT TCATTCCTCT CACCGTCGGA
GGCGGAATCA ACTCGGTCGA GCGCGCCAGG GAGGTTTTTC TGCACGGTGC TGACAAGGTT
TCTGTCAATA CCGCAGCAGT CAATGACCCC TTCCTGATTA CCCGGATTGC AGAAAGATAT
GGATCCCAGG CTGTTGTGGT TGCCATCGAC ATCAAAAAAA CGGGGGAAGA TTATCTGGTC
TTTACCCATT CAGGCAAAAA GCCAACCTGC TATGAAGCAC TTGAATGGGC CCATAAAGTC
CAGGAACTCG GCGCAGGAGA GATCCTGCTG ACCAGTATGG ATCGGGACGG TACAAAAGAG
GGATATGACA ACGATATTCT CGCCAAAATA TCAACATCAG TCCACATTCC CGTCATCGCA
TCCGGAGGCG CAGGCAATCT TGAACACCTC TATGACGGTT TTACCAAAGG CCATGCTGAC
GCAGCGCTTG CAGCATCAAT CTTCCACTTC CGCCAGCACT CAATCCGTGA AGCCAAAGAG
TACTTGCGGC AAAGAGGCAT CACGGTCAGA ATCTGA
|
|---|
| Protein sequence | MLAKRIIPCL DVRDGRVVKG INFEGLRDAG SILEQARFYN NELADELVFL DISASLESRK
TTLEEVLKVS GEIFIPLTVG GGINSVERAR EVFLHGADKV SVNTAAVNDP FLITRIAERY
GSQAVVVAID IKKTGEDYLV FTHSGKKPTC YEALEWAHKV QELGAGEILL TSMDRDGTKE
GYDNDILAKI STSVHIPVIA SGGAGNLEHL YDGFTKGHAD AALAASIFHF RQHSIREAKE
YLRQRGITVR I
|
|---|
| |