Gene Ppha_0996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0996 
Symbol 
ID6461007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1031760 
End bp1032644 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content47% 
IMG OID642727247 
Productprotein of unknown function DUF344 
Protein accessionYP_002017897 
Protein GI194336103 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATCT CTTTTGATCA TGATGCTCTC TGGATTCGTA AGGGTGAACA GGTGAGTCTC 
GACAAGCGTC CAACTCTTGT TGAGCCCATG TATCGTTCCA AAAAAGAGTA TAAAACCATG
CTTGCTGATC ATGTTGCGCA GTTGAGTAAA CTGCAGCAGG TTCATTATGC CGATAACCGC
TATTCGGTGT TGCTGATTTT TCAGGCGATG GATGCTGCTG GCAAGGATGG TGTTATCAAG
CATGTGATGT CCGGTGTGAA TCCGCAGGGT TGTCAGGTTT TCAGTTTCAA GCATCCTTCG
GCCCAGGAAC TTGATCATGA TTTTCTCTGG AGAAGCAATC GTTGCCTGCC AGCGCGGGGT
CATATAGGGA TATTCAATCG TTCATACTAT GAGGAGGTGC TGATTGTTCG AGTGCATCCT
GAGATACTTG TTGTGCAGGG TATTCCGGAT GAGCTGATCA AGGGTGGTGA AGTTTGGGCA
GAACGGTATC AATCGATTGT TGACATGGAA CGGCATCTCT ATCGCAATGG GACAAGGATC
GTGAAGTTTT TTCTTCATTT GTCGAAAGAG GAGCAGAGGA AACGATTTCT GGACCGGATT
AATGCACCGG CAAAAAACTG GAAATTCAGC GCTGCTGACC TTGAAGAGCG CAAGTACTGG
GAACAATATA TGCAGGCTTA TGAGAGCTGC CTCAGCGCTA CCAGCAGCAA GCAGGCGCCA
TGGTATGTTG TTCCTGCTGA TGACAAACAA ACTGCTCGCC TGATTGTGTC ACAAATCATC
GTTCATACCT TGACTGATCT TGGTCTGTCA TACCCTGAAA CAAGTGATCA ACGTCACAGT
GAGTTGAAGA ATATTCGCAA ACGGCTGATG GAAGAGCGTG CATGA
 
Protein sequence
MPISFDHDAL WIRKGEQVSL DKRPTLVEPM YRSKKEYKTM LADHVAQLSK LQQVHYADNR 
YSVLLIFQAM DAAGKDGVIK HVMSGVNPQG CQVFSFKHPS AQELDHDFLW RSNRCLPARG
HIGIFNRSYY EEVLIVRVHP EILVVQGIPD ELIKGGEVWA ERYQSIVDME RHLYRNGTRI
VKFFLHLSKE EQRKRFLDRI NAPAKNWKFS AADLEERKYW EQYMQAYESC LSATSSKQAP
WYVVPADDKQ TARLIVSQII VHTLTDLGLS YPETSDQRHS ELKNIRKRLM EERA