| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0982 |
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| Symbol | |
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| ID | 6462022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1017124 |
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| End bp | 1018827 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642727233 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_002017883 |
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| Protein GI | 194336089 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTGGAA TGAGACGACC CATCATCCGA AAAATCCTCA CGGTGGCAGG AATCCTTCTG
CTTCTTGCCG AAATCTCCGC CTGCCAGCAG AAGAACGACA AGATCCGCAA GGAGCAGATT
GTTATCGGCG TTTCGGCTGA CTTCGACTAC CTCAATCCCC TGCTCATCCA GCTCTCCATG
TCACGAGAGG TGTGCTCGCT GCTCTATCCT TCGCTGGTCA AGCCCTCCTA CGATGAAAAA
AAGGGGGCGA TAACCTTTCG GCCCAATACG GCCAAAAGCT GGGAGTTTTC CGGTGACGGA
AAAAAAGCAA CCTTCAATTT ACGCAGCGAT GCCGTTTGGG AAGACGGAAA AAAGGTGACC
TCGCATGATT TCAAGTACTC CTATGCCCTC TACAAGAACC CCAAAATAGC CAGTTCACGG
CAGCACTACC TCAACGACCT GCTGCTGCTT CCCGATGGAA CGGCTGATAT CGAACGCGCT
GTTGAAACCC CCGACGATTC CACGCTTGTA CTCCATTTCA GCAAAGCGAT GGCAGAGGAA
ATTGTGCTCG ACCATTTCAA TGATTTAATG CCGGTAGCGG AGCATCTCTT CAAAGCATAC
TCACCAGACG ATATCCGATC AAAAGCTGCT GAAATACCGG TAGTGAGCGC GGGGCCCTTC
AAGGTTAAAG AGTGGGCACG CCAATCGAAG CTGGAACTTG TCACCAACCC CACTTCACAT
CTTCCCCGGC CTGCAACCAT AAAAAACATG GTTTTTCTGG TTGTACCTGA ATACACCACC
CGTCTGGCCA TGCTGAAATC AGGACAGATC GATGCTATGA TTTCGGCAGG AGGAATCAAC
CCCAAAGATA TCAGGGAGCT GGTAAAAAGC TCACCCTCAA TTGTCATCAA GCCCGTCAAA
AACCGTTATT TCGACAGTAT CGTCTGGCTT AACATCGACG GAGAGAGCTG GCGCAACAGT
CACAAAGTGG TGCCGAACGC CCTCTTTGGC GACAAAGTGG TGCGCCAGGC GCTTACACTT
GCCATTGATC GGCAGTCCAT TATCGATGGC TTCATGGGGC CGGAGCACGC CACCATCGTC
AACACATCGC TTTCACCAGC CTACCGAGAA ATTGCTGACA CCTCTCTTGA CCCATACGGT
TACAACCCTC AGAAAGCGAC CGCTCTCTTG CGCTCCGCCG GATGGGCACC AGGCCCCGAC
GGTATCCTGC AGAAAAATGG CAAAAAATTC TCCTTTGAGC TTGCAGCACC GGTCGGCAAC
CCACGGCGCA ACTATGCAGC AACCATTGTT CAGCAAAACC TCCGGGAAAT CGGCATTGAG
TGCCACCTGA AATTTGACGA AAGCCTTATT TTCAACAAAA ACCAGAACGA GTTCCGCTAC
GATGCCGCCC TTTCAGGCAT GGCTGCAGAA ACACTCCCTT TCCAGCTTAT TATCTGGGGC
TCTGACTTTG CCCATCGACC ATTCAACTCT TCCGCCTTTC AGAACAGGGA ACTTGACACC
ATTATCGGAG AGCTGAGCCG TCCCCTGCCC TCTGTACGCA GCCTTGCACT CTGGAAAAGC
TATCAGAAAA TTCTGCACGA TGAACAGCCC AGAAGCTTCC TCTACTACTA CGATGAGCTT
GAAGGAATAA ACAACCGGGT CAAAAACACC AATATCAACC TTATCGCCAC GCTCTACAAC
GCATGGGAGT GGAGCGTGCA ATAA
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| Protein sequence | MCGMRRPIIR KILTVAGILL LLAEISACQQ KNDKIRKEQI VIGVSADFDY LNPLLIQLSM
SREVCSLLYP SLVKPSYDEK KGAITFRPNT AKSWEFSGDG KKATFNLRSD AVWEDGKKVT
SHDFKYSYAL YKNPKIASSR QHYLNDLLLL PDGTADIERA VETPDDSTLV LHFSKAMAEE
IVLDHFNDLM PVAEHLFKAY SPDDIRSKAA EIPVVSAGPF KVKEWARQSK LELVTNPTSH
LPRPATIKNM VFLVVPEYTT RLAMLKSGQI DAMISAGGIN PKDIRELVKS SPSIVIKPVK
NRYFDSIVWL NIDGESWRNS HKVVPNALFG DKVVRQALTL AIDRQSIIDG FMGPEHATIV
NTSLSPAYRE IADTSLDPYG YNPQKATALL RSAGWAPGPD GILQKNGKKF SFELAAPVGN
PRRNYAATIV QQNLREIGIE CHLKFDESLI FNKNQNEFRY DAALSGMAAE TLPFQLIIWG
SDFAHRPFNS SAFQNRELDT IIGELSRPLP SVRSLALWKS YQKILHDEQP RSFLYYYDEL
EGINNRVKNT NINLIATLYN AWEWSVQ
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