Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0980 |
Symbol | |
ID | 6460979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1015521 |
End bp | 1016525 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642727231 |
Product | chlorophyll synthesis pathway, BchC |
Protein accession | YP_002017881 |
Protein GI | 194336087 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAA AAGCCATTGT CTTCAGCGGT GTACGCCAGA TTGAACTCTG TGAGGTGACC CTGAAATCCC TCTCTTCCAC TGATGTGCTG GTTGAAACAT GGTGGTCGTC AATCAGCACC GGCACGGAAA AAATGGCCTA TAATGGCCTG ATTCCCTCCT GGCCCTTCAT CTTTCCCTTT ATTCCGGGAT ATGAAACGGT CGGAAAAATT ATTCAGGCGG GCGACCATGT CAACCAAAGT CTGATCGGAA AATTCGCCTA TGTAGCCGGC TCATTCGGCT ATGAAGGAGT CAATGCTGCT TTCGGTGGAG CTTCGGAATA TATCGCCTGC CCGGTCGAGA GCATAACCGT ACTCGACAAC ATCGAAAATC CAAAGTGCGG CATCGCCCTC CCGCTTGGCG CAACCGCCCT GCACATTGTT GACCTGGCTC AGGTTGAAAA CAAAAAGGTG CTGGTACTTG GTCAGGGAGC GGTAGGCATT CTTGCCGCTG AACTGGCAAA GCTTATGGGT GCCAAACTGG TGGCGGCAAC CGAACCCAAC AAAAAGAGGT TGCAGCTCTC ATCGGCTGAC CTGAAAGTTA ATCCTGAAAC AGAAGATGTT GCCGCTGCCC TTGCCGGACA TGAGTTCGAC GTTCTGATCG ACAGTACCGG CATCATGAGC GCCATCGATA CCGGCCTCCG CTTTCTGAAG TTTCAGGGAA CCGTGATCTT TGGAGGCTAT TACCAGCGAA TCAACATCGA CTACTCACAG GCCTTTCAGA AAGAGCTCTC CTTCATTGCT GCCAAACAGT GGGCCAAAGG CGATCTTGAG CGGGTACGAG AGCTGATTGC TCAGCAAAAA CTCAATGCGG CAAGAATTTT CACCCATCAA CATACCGTTG AAGAGGATAT CACGGAAGCC TATCTGCAGG CATTCACCAA TCCTGACTGC ATGAAAATGA TTCTGCTCTG GAAAACCGGA ACACAACAGG AGGAGGCAGG ATGCCCAATC ACCGCAAAAT CATAA
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Protein sequence | MKAKAIVFSG VRQIELCEVT LKSLSSTDVL VETWWSSIST GTEKMAYNGL IPSWPFIFPF IPGYETVGKI IQAGDHVNQS LIGKFAYVAG SFGYEGVNAA FGGASEYIAC PVESITVLDN IENPKCGIAL PLGATALHIV DLAQVENKKV LVLGQGAVGI LAAELAKLMG AKLVAATEPN KKRLQLSSAD LKVNPETEDV AAALAGHEFD VLIDSTGIMS AIDTGLRFLK FQGTVIFGGY YQRINIDYSQ AFQKELSFIA AKQWAKGDLE RVRELIAQQK LNAARIFTHQ HTVEEDITEA YLQAFTNPDC MKMILLWKTG TQQEEAGCPI TAKS
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