| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0966 |
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| Symbol | |
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| ID | 6460974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1004726 |
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| End bp | 1005946 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642727219 |
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| Product | transposase IS204/IS1001/IS1096/IS1165 family protein |
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| Protein accession | YP_002017869 |
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| Protein GI | 194336075 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3464] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0650816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAAC TAACCGAGCA TTACCAGCAA TTACTGGGAT TTCCTGCCAT CTGGGAGGTC
GATGATGTCA ACCTTTCCGT TTCTGGTCTG AAGATAGAAG TTCACCTCCG TTTTGTAGGC
GATGAAGTAA TATGCCCTCA ATGTGGGGTG CGCGGGAAAG CCTATGACAA GGCCCCTGAA
CAACGTTGGC GGCATCTTGA TACCATGCAG TTTGAAACCA TCATCATAGC ACGCATTCCC
CGTTGTCAGT GCGAAACGTG TGGTGTGAAG ACCATAGCAG TCCCTTGGGC GGCCCCCCAT
TCCCGTTTTA CCCTCATGTT TGAAGGTTTT GCCGTTGCTC TGCTCCAGCA CTGTTCCAGT
GTACAAGCGG CCTCAAATAT ACTCAAGCTT GATTGGCATG CTGTGGATCA GATTATGAAA
CGTGCTGTAG AGCGAGGACT TCTACGCCGT GAGCCCGATG ATGTAGTGCA TGTAGGTATG
GACGAAAAAA GCTTCAGGTC GGGCCAGAAA TACATCACCA TACTCAATGA TCTTGATAAA
AGCCGAGTAC TTGATGTCAT TGAGGATCGG ACACTGACAG CAACGAAAAA GCTGTTAGGA
ACCCTTTCAA AACAACAACG AAAGGCAGTT AAGTCGGTAT CGCTGGATAT GTGGCAAGCC
TTTGCAACAG CTACACATAA GCTCCTTCCT GCGGCTGATA TTGTTCACGA CCGGTTTCAC
ATCAGCAAAT ATCTTAATGA CGCAGTTAAC AAGGTTCGGC ATCAGGAATC ACAGGAACTG
AAGAAAGATG GGGATACAAG GTTGGTTGGC TCGAAATACA CCTGGCTTCG AAATCCCGAA
AAGATGACCA AGAGCCAAAA AACACGGTTT AACGAGTTGA TAGCATGCGA ATTTAAGACC
GGTGTGGCTT GGGTGTTGAA GAATATCTTT CGTGATTTCT GGAACTGCTC ATCAGGACTG
AGGGGCGAGA TATTTTTCGC GTACTGGTGT GAGTTAGTCG ACAAGACAAA ACTGAAGCCA
CTGATAAAAG TGAAAGATAT GATGGAACGT CATAAAGGGA ACATTCTCAA TTACTTCAAA
CATCAAGTCA GCAACGCTAT ATCGGAAGGA ATAAACAGCA AAATCCAGTT AATAAAAGCA
ACTGCTCGAG GGTTTCGAGG CTTCGAAAGC TATCGAACAA GGATCCTCTT TTACTGTGGG
AAACTGGATA TGAAAATCTG A
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| Protein sequence | MQKLTEHYQQ LLGFPAIWEV DDVNLSVSGL KIEVHLRFVG DEVICPQCGV RGKAYDKAPE
QRWRHLDTMQ FETIIIARIP RCQCETCGVK TIAVPWAAPH SRFTLMFEGF AVALLQHCSS
VQAASNILKL DWHAVDQIMK RAVERGLLRR EPDDVVHVGM DEKSFRSGQK YITILNDLDK
SRVLDVIEDR TLTATKKLLG TLSKQQRKAV KSVSLDMWQA FATATHKLLP AADIVHDRFH
ISKYLNDAVN KVRHQESQEL KKDGDTRLVG SKYTWLRNPE KMTKSQKTRF NELIACEFKT
GVAWVLKNIF RDFWNCSSGL RGEIFFAYWC ELVDKTKLKP LIKVKDMMER HKGNILNYFK
HQVSNAISEG INSKIQLIKA TARGFRGFES YRTRILFYCG KLDMKI
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