Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0954 |
Symbol | |
ID | 6460856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 994102 |
End bp | 995691 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642727208 |
Product | Glutamate synthase (NADPH) |
Protein accession | YP_002017858 |
Protein GI | 194336064 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0069] Glutamate synthase domain 2 [COG1773] Rubredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAT GGCAATGTGG GCTATGCTCC TATATCTACG ACGAAAACAA AGAACCTGTC GCATGGGAGG CTCTTCCGAA TGAGTGGATG TGCCCTGTTT GCGGTTCGCC AAAATCCTCA TTTGTCCTGC TGAAAGAAGA GCAACCCATT GTTCCGGCAG TTGAAAGCGA ACCTGTTTCA ACAAACATCT ATGCATGTGC TCTCTGTTCG TATGCTTATG ATGAAGCAAA AGAGGGTCTC CTGTGGCCAG CTCTTCCCGA CGACTGGAGA TGTCCTGTCT GCGGCTCAGG CAAAGAGAGC TTCAGCCTTG CAGCATCCGA CCGACCGGCA GCCGCCGGGA TTGTTGCTGA AAGAGGGTCG GGAGAAGAGT ACCTGGCGGA ATGGCGACGG CAGGCTGACG ATTTTGAAAC CAACATGGCC GATATCCACC ATCTTGCCAT GACGGGAAAA TCGGTAATCG AACCTATGCG TTCGCGCCTT CCCTCCTTCT CCTGGGACGA AATCCTCATG AAAGGTGCAC AGCTTGCAAA ACTGCCGCTC AACAAAACAC AGCTGGTTGT CACACAAACA GTGATTGGTC CCGCTGCAGC TTTTCCCCTT GTCCTTGAAA CACCGATTTT TGTCTCCCAT ATGTCCTTTG GAGCGTTGTC GAGAGAAGCA AAGCTCGCTC TTGCCAAGGG CAGTGCGCAG GCAAAAACAG CCATGTGTTC AGGTGAAGGG GGTATTCTGC CCGAATCACT TGCAGCCTCC TACCGTTATA TTTTTGAATA CGTTCCCAAC AAATACAGTG TAACCGATGA GAACCTGAAG CTGGTTGATG CCGTGGAAAT CAAAATCGGA CAATCCGCAA AACCGGGAAT GGGCGGTCAT CTTCCGGGGA GCAAGGTCAC CTGTGAAATC GCTGCCATCC GCGGATTTCG GGAAGGACAG GATATCATCA GCCCGTCTCA CTTCCCGGAT ATTCGCACAA AAGAAGACTT GAGAGATACG GTCAGCCATT TGCGCCTGAA AACCGGGGGA AAACCGATTG GCATCAAGCT TGCGGCTGGC CATATCGAAG AAGATATCGA TATCGCTCTC TTTGCGGGGG TTGATTTCAT CACTATCGAT GGTCGTGCAG GTGGAACCGG CGCTTCTCCC AAGGTTGTCA AAAATGCCGC CTCCGTGCCA ACCATCTTCG CGCTGGCAAG AGCAAGAAAA ATACTCGATT CGAGAGGGGC TGACAGTGTT TCTCTCATTA TTACCGGTGG CTTGCGTCTC TCTTCAGACT TCGCCAAGGC GCTGGCAATG GGGGCCGATG CCATAGCTGT CGGGACTGCG GCCATGATGG CGGCAGGATG TCAGCAGTAC CGCATCTGCA ATACCGATAA ATGTCCCGTC GGCATTGCCA CGCAGGATCC GGTACTTCGA GCCCGTATGG ATGTCGATAA ATCCGCCATC CGTGTCGCAA ACTTTTTCAA AGCCGTTACC GAAGAGCTCC GTGACTTTGC CCGTCTGACC GGTAACGATA ATGTTCACCA CCTCTCGCCA ACCGATTTAT GTACCACCAA TTCCGAAATT TCCAATCATA CCCCTATCGA GCACGTCTGA
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Protein sequence | MAKWQCGLCS YIYDENKEPV AWEALPNEWM CPVCGSPKSS FVLLKEEQPI VPAVESEPVS TNIYACALCS YAYDEAKEGL LWPALPDDWR CPVCGSGKES FSLAASDRPA AAGIVAERGS GEEYLAEWRR QADDFETNMA DIHHLAMTGK SVIEPMRSRL PSFSWDEILM KGAQLAKLPL NKTQLVVTQT VIGPAAAFPL VLETPIFVSH MSFGALSREA KLALAKGSAQ AKTAMCSGEG GILPESLAAS YRYIFEYVPN KYSVTDENLK LVDAVEIKIG QSAKPGMGGH LPGSKVTCEI AAIRGFREGQ DIISPSHFPD IRTKEDLRDT VSHLRLKTGG KPIGIKLAAG HIEEDIDIAL FAGVDFITID GRAGGTGASP KVVKNAASVP TIFALARARK ILDSRGADSV SLIITGGLRL SSDFAKALAM GADAIAVGTA AMMAAGCQQY RICNTDKCPV GIATQDPVLR ARMDVDKSAI RVANFFKAVT EELRDFARLT GNDNVHHLSP TDLCTTNSEI SNHTPIEHV
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