Gene Ppha_0954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0954 
Symbol 
ID6460856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp994102 
End bp995691 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content52% 
IMG OID642727208 
ProductGlutamate synthase (NADPH) 
Protein accessionYP_002017858 
Protein GI194336064 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0069] Glutamate synthase domain 2
[COG1773] Rubredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAT GGCAATGTGG GCTATGCTCC TATATCTACG ACGAAAACAA AGAACCTGTC 
GCATGGGAGG CTCTTCCGAA TGAGTGGATG TGCCCTGTTT GCGGTTCGCC AAAATCCTCA
TTTGTCCTGC TGAAAGAAGA GCAACCCATT GTTCCGGCAG TTGAAAGCGA ACCTGTTTCA
ACAAACATCT ATGCATGTGC TCTCTGTTCG TATGCTTATG ATGAAGCAAA AGAGGGTCTC
CTGTGGCCAG CTCTTCCCGA CGACTGGAGA TGTCCTGTCT GCGGCTCAGG CAAAGAGAGC
TTCAGCCTTG CAGCATCCGA CCGACCGGCA GCCGCCGGGA TTGTTGCTGA AAGAGGGTCG
GGAGAAGAGT ACCTGGCGGA ATGGCGACGG CAGGCTGACG ATTTTGAAAC CAACATGGCC
GATATCCACC ATCTTGCCAT GACGGGAAAA TCGGTAATCG AACCTATGCG TTCGCGCCTT
CCCTCCTTCT CCTGGGACGA AATCCTCATG AAAGGTGCAC AGCTTGCAAA ACTGCCGCTC
AACAAAACAC AGCTGGTTGT CACACAAACA GTGATTGGTC CCGCTGCAGC TTTTCCCCTT
GTCCTTGAAA CACCGATTTT TGTCTCCCAT ATGTCCTTTG GAGCGTTGTC GAGAGAAGCA
AAGCTCGCTC TTGCCAAGGG CAGTGCGCAG GCAAAAACAG CCATGTGTTC AGGTGAAGGG
GGTATTCTGC CCGAATCACT TGCAGCCTCC TACCGTTATA TTTTTGAATA CGTTCCCAAC
AAATACAGTG TAACCGATGA GAACCTGAAG CTGGTTGATG CCGTGGAAAT CAAAATCGGA
CAATCCGCAA AACCGGGAAT GGGCGGTCAT CTTCCGGGGA GCAAGGTCAC CTGTGAAATC
GCTGCCATCC GCGGATTTCG GGAAGGACAG GATATCATCA GCCCGTCTCA CTTCCCGGAT
ATTCGCACAA AAGAAGACTT GAGAGATACG GTCAGCCATT TGCGCCTGAA AACCGGGGGA
AAACCGATTG GCATCAAGCT TGCGGCTGGC CATATCGAAG AAGATATCGA TATCGCTCTC
TTTGCGGGGG TTGATTTCAT CACTATCGAT GGTCGTGCAG GTGGAACCGG CGCTTCTCCC
AAGGTTGTCA AAAATGCCGC CTCCGTGCCA ACCATCTTCG CGCTGGCAAG AGCAAGAAAA
ATACTCGATT CGAGAGGGGC TGACAGTGTT TCTCTCATTA TTACCGGTGG CTTGCGTCTC
TCTTCAGACT TCGCCAAGGC GCTGGCAATG GGGGCCGATG CCATAGCTGT CGGGACTGCG
GCCATGATGG CGGCAGGATG TCAGCAGTAC CGCATCTGCA ATACCGATAA ATGTCCCGTC
GGCATTGCCA CGCAGGATCC GGTACTTCGA GCCCGTATGG ATGTCGATAA ATCCGCCATC
CGTGTCGCAA ACTTTTTCAA AGCCGTTACC GAAGAGCTCC GTGACTTTGC CCGTCTGACC
GGTAACGATA ATGTTCACCA CCTCTCGCCA ACCGATTTAT GTACCACCAA TTCCGAAATT
TCCAATCATA CCCCTATCGA GCACGTCTGA
 
Protein sequence
MAKWQCGLCS YIYDENKEPV AWEALPNEWM CPVCGSPKSS FVLLKEEQPI VPAVESEPVS 
TNIYACALCS YAYDEAKEGL LWPALPDDWR CPVCGSGKES FSLAASDRPA AAGIVAERGS
GEEYLAEWRR QADDFETNMA DIHHLAMTGK SVIEPMRSRL PSFSWDEILM KGAQLAKLPL
NKTQLVVTQT VIGPAAAFPL VLETPIFVSH MSFGALSREA KLALAKGSAQ AKTAMCSGEG
GILPESLAAS YRYIFEYVPN KYSVTDENLK LVDAVEIKIG QSAKPGMGGH LPGSKVTCEI
AAIRGFREGQ DIISPSHFPD IRTKEDLRDT VSHLRLKTGG KPIGIKLAAG HIEEDIDIAL
FAGVDFITID GRAGGTGASP KVVKNAASVP TIFALARARK ILDSRGADSV SLIITGGLRL
SSDFAKALAM GADAIAVGTA AMMAAGCQQY RICNTDKCPV GIATQDPVLR ARMDVDKSAI
RVANFFKAVT EELRDFARLT GNDNVHHLSP TDLCTTNSEI SNHTPIEHV