Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0933 |
Symbol | |
ID | 6460917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 969896 |
End bp | 970627 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642727187 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002017837 |
Protein GI | 194336043 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAA TCATCATCAT AACCGGCGCT GGCAAAGGAA TCGGCAAAGC CATTGCCCTT GAATTTGCAC AAGCTACCGT GAAGCACGAA GGATTTGAGC CCGTCCTGAT CCTTGCATCA AGAACCATTT CGGATCTGGA GTCAGTTGCG TCCGAATGCC GTTCTTTCGA AGCAGCAGCA GATATCTTTC CTGTGGACAT TGCCGACCCC GCCCAGATTG AGCATCTTGT CAGCACCACA CTGGAGCGCT ACGGCACAAT TGATTGTCTG ATCAACAATG CTGGCGTTGG ACGATTCAAG CCATTCACCG AATTGACAGA AGAGGATTTT GATTATACGA TAGCAACAAA CCTCAAAGGC ACTTTTTTCC TCACACAGAG AGTTTTTGCC CTGATGGAAA AGAAACGGTC GGGTCATATT TTCTTTATCA CCTCCATTGC CGCAGAAACA GCTTTCAAAA GTTCTTCGAT CTACTGCATG TCCAAATTTG GGCAGAAAGG CTTGGTCGAG GCAATACGCT TATATGCTAA AACGTGTAAT GTCCGTATTA CCAATGTCAT GCCCGGTGCG GTTTATACGC CAATGTGGGG TGAAGTTCCT GATGCCATGA AGTCCGTCAT GATGAGGCCT GAAGATATTT CCGCTCCCGT CGTCAACGCC TATTTCATGC CACAGAGAAC GTCGGTGGAA GAGCTGGTGC TCAGACCGGT TTGCGGGGAT ATCAATGAGT GA
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Protein sequence | MKQIIIITGA GKGIGKAIAL EFAQATVKHE GFEPVLILAS RTISDLESVA SECRSFEAAA DIFPVDIADP AQIEHLVSTT LERYGTIDCL INNAGVGRFK PFTELTEEDF DYTIATNLKG TFFLTQRVFA LMEKKRSGHI FFITSIAAET AFKSSSIYCM SKFGQKGLVE AIRLYAKTCN VRITNVMPGA VYTPMWGEVP DAMKSVMMRP EDISAPVVNA YFMPQRTSVE ELVLRPVCGD INE
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