Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0931 |
Symbol | |
ID | 6460923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 968034 |
End bp | 969329 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642727185 |
Product | seryl-tRNA synthetase |
Protein accession | YP_002017835 |
Protein GI | 194336041 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGATA TCAACACTAT CCGTCAGCAT CCCGAAGAAA TCATTTCCAT GCTGCACAAC CGCCAGCTTG CTTCTGAAGA ACCAAAAATT GAACAGCTTC TTAACCTCGA CAGGGAGCGC AAAGGGTTGG TTCAGCGTTC GGACGATCTG AAAGCACTGC GCAACAAAGT TTCAAAAGAG ATCGCAGAGA TAAAAAAAAG TGGTATTGGC TCATCCGGCG AACTTATCCT CCAGATGAAA TCAGTATCGG AAGAAATTGC CGGAATGGAT ACCTCGCTTG GCCATCTTGA AGAGGAGATT GAAACCATTC TTCTGGGCCT CCCCAACAAG CTGCATCCAT CCGTTCCTGT CGGACGTTCT GCTGACGACA ACCAGATCTT CAAGGAGCCG ATATCTTTTC CCTACCATCT TGACTTTCCG CTCAAGAACC ATCTTGAACT GGGCAAATCC CTTCGGATTC TTGATTTTGA ACGGGGCGCA AAAGTTTGCG GAGCGGGATT TCCTGTCTAT ATCGGCAAAG GGGCTCGACT TGAACGTGCA CTGATCAATT TCATGCTCGA CTGCCATACC GAACGTCACG GCTATACAGA GGTCTTTCCG CCCTTTTTCG TCAATCAGGA GTCGCTCAGA GGAACCGGGC AGTGGCCAAA ATTTGCCGAT CAGGTTTACC ACATGGAGGA GGATGATCTT TACGCCATAC CAACAGCCGA GGTACCGATA ACCAACCTGC ACCGGGGAGA GATGCTGGAT ACAAAAACGC TCCCAATCTC CTATGCAGCC TATTCAGCCT GTTTCCGTCG CGAAGCGGGA AGTTACGGCA AAGATACCAG AGGATTCCTC AGGGTGCACC AGTTCAACAA GGTGGAAATG GTAAAGTTCA CCCGACCGGA AGAGTCGTAT GAGGCGCTTG AAACGATTCG AGAAAACGCT GAAGCAATTC TCACTGCGCT CAAAATCCCC TACCGGGTAC TTTTACTCTG CAGCGGCGAT ATCAGCGCCA ATGCAACGAA ATGTTATGAT ATCGAGGTCT GGTCACCAGC CGAGCAGAAA TATCTTGAAG CATCAAGCTG TTCAAACTTT GAAGATTACC AGGCCCGGCG CGCCAACATC CGTTTCAAGT CGGAGAGTAA TGCAAAACCG GAGTTCGTCC ACACCCTGAA TGGCTCAGGC CTGGCAACCT CCCGCCTTAT GGTCTCCCTG CTTGAGCACT ACCAGACTGC GGAAGGCTCC ATCATGGTGC CGGAGGTATT GCGGCACTAT ACCAGGTTTG ACGAGATTAC TCAGGCTGCT GAGTGA
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Protein sequence | MLDINTIRQH PEEIISMLHN RQLASEEPKI EQLLNLDRER KGLVQRSDDL KALRNKVSKE IAEIKKSGIG SSGELILQMK SVSEEIAGMD TSLGHLEEEI ETILLGLPNK LHPSVPVGRS ADDNQIFKEP ISFPYHLDFP LKNHLELGKS LRILDFERGA KVCGAGFPVY IGKGARLERA LINFMLDCHT ERHGYTEVFP PFFVNQESLR GTGQWPKFAD QVYHMEEDDL YAIPTAEVPI TNLHRGEMLD TKTLPISYAA YSACFRREAG SYGKDTRGFL RVHQFNKVEM VKFTRPEESY EALETIRENA EAILTALKIP YRVLLLCSGD ISANATKCYD IEVWSPAEQK YLEASSCSNF EDYQARRANI RFKSESNAKP EFVHTLNGSG LATSRLMVSL LEHYQTAEGS IMVPEVLRHY TRFDEITQAA E
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