| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0928 |
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| Symbol | |
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| ID | 6460935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 963997 |
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| End bp | 965334 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642727182 |
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| Product | sun protein |
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| Protein accession | YP_002017832 |
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| Protein GI | 194336038 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases
[COG0781] Transcription termination factor |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB
[TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAG CTCGAGAACT GGCATTACAA GTCCTGCAAT CACTTGAAAC CGGAAAACAG
CAATCCGACA CGCTCCTGCA CCGATCGCTG CATCACTCCA CACTAAACCG TGCAGATCGG
GCACTCTCCA CTGGACTGGT CAACGGCGTT CTGCGTTACC GCCTTCAGCT TGATTTTGTT
ATCGCCCAAT TCTACCACCA CAAGCTTGAA AAGGCGGCGC CGATCATGAA AAACATCCTT
CGCCTTGGAG TTTATCAGAT CCTCTTCCTC AACAAGGTAC CCGACTGGGC AGCCGTCAAC
GAATGCGTGA AGCTTGCCAG AAAATACAAA GGTGAGCGAA TGTCGAAACT GGTCAACGGC
GTTCTGAGAA AAATAACTCC GGAAAGCGTC ACCCTTGACG AGTGGCTGAA AGAAAAAAAA
AATGAAGAGC AGCTCGCCGT AAAATATTCA CACCCACAAT GGCTCGTCGA ACGCTGGAGC
GCAGCATACG GCAACGAAAA AAGCGAGGCT CTCCTCTCCT ATAACAACCA GTTTCCCTCC
TTTGGATTCA GGATAAACCG ACTGAAAAAT TCAGCAGGAC GTTTTTTTTC TGACCCGGCA
ATGGCCGCCG TGATGCATGA AGAGAGTGGT ATTGACAATA TCTTTCTCTC AAAAGATTTT
AACGCTTTTG AACCCGCCGT GATCGACGGC CGCCTCACGG TTCAAAACCC GACACAGGCT
CTTGCATGCC TGCTGTTGCA CCCCGCTCCC GGCAGCAATG TCCTCGATTT GTGCGCAGCA
CCTGGCGGCA AAGCCACCTT CATGGCTGAA CTGATGGAAA ACAGAGGGCA GATTACCGCT
GTTGATCGCT ATGAACAGAA GCTTGAAAAA ATAGAGTCTC ATGCAGAGGC TCTTGGCATC
ACCATCATCA AAACCGTAAT GGAGGATGCC CGAAGCTTTA TGCCTGAAAT CCATCCCGAT
GCCATTCTGC TCGATGCTCC CTGTACAGGT ACCGGAGTAC TTGGACGGCG AGCTGAACTT
CGATGGAAAC TGAACCCGGA AATGCTGCAG GAGCTTCTGG TTCTGCAGGC AGAGTTACTT
GATCATGCCG CAGAACTGCT TGATGAAAAT GGTATTCTGG TCTATGCTAC CTGTTCCATC
GAGCCCGAAG AAAACAACTT GCAAATTTAT TCGTTTCTTC GCAGACATCC TGATTTTATT
GCCGATCCCG TTGGTGAGCA TCTCCCGGAA CAATTCCGGC AAAGCAATGA GGGATGTGGA
GCAATCCTCA CACTCCCGGG CGAACACCCC GGTTTTGATG GTGGATTTTG CCAGCGGTTG
CGTAAGGCAA AAGGCTGA
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| Protein sequence | MTTARELALQ VLQSLETGKQ QSDTLLHRSL HHSTLNRADR ALSTGLVNGV LRYRLQLDFV
IAQFYHHKLE KAAPIMKNIL RLGVYQILFL NKVPDWAAVN ECVKLARKYK GERMSKLVNG
VLRKITPESV TLDEWLKEKK NEEQLAVKYS HPQWLVERWS AAYGNEKSEA LLSYNNQFPS
FGFRINRLKN SAGRFFSDPA MAAVMHEESG IDNIFLSKDF NAFEPAVIDG RLTVQNPTQA
LACLLLHPAP GSNVLDLCAA PGGKATFMAE LMENRGQITA VDRYEQKLEK IESHAEALGI
TIIKTVMEDA RSFMPEIHPD AILLDAPCTG TGVLGRRAEL RWKLNPEMLQ ELLVLQAELL
DHAAELLDEN GILVYATCSI EPEENNLQIY SFLRRHPDFI ADPVGEHLPE QFRQSNEGCG
AILTLPGEHP GFDGGFCQRL RKAKG
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