| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0924 |
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| Symbol | |
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| ID | 6460944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 959112 |
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| End bp | 960911 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642727178 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_002017828 |
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| Protein GI | 194336034 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTTC TCGGCCTGCA GCTTGCAGAA CCATTAATGA GGGCACTTGC CGATGTCGGG
TATGAGAACC CTACTCCAAT TCAGGCCCAG ACCATCCCAC TGATTCTTGA AGGACGTGAC
GTCCTTGGCC AGGCACAGAC CGGTACAGGA AAAACTGCCG CTTTTGCCCT GCCAATTCTC
TCCAATATTG ATCTTGAACA TGCTGAACCC CAGGCCCTTG TGCTGGCTCC TACAAGAGAG
CTTGCCATTC AGGTTGCCGA GGCGTTTCAG CGTTATGCTG AACATCTCAA GGGTTTTCAT
GTTGTCCCGA TTTACGGGGG ACAGGACTAC GGAATTCAGC TTCGCATGCT GAGACGTGGT
GTGCATATTG TTGTCGGTAC ACCTGGTCGA GTTATGGATC ATATGCGTCG TGGTTCGCTC
AATCTTGCTT CGCTGAAATG TCTGGTACTG GACGAAGCCG ATGAAATGCT CCGCATGGGA
TTTATTGACG ATGTTGAGTG GATCCTTGAT CAGACACCAA AAGGTCGTCA GGTTGCTCTT
TTTTCGGCAA CCATGCCGCC GGTTATTCGC CGTATTGCGC AAAAGTATCT GCATAATCCT
GCGGAAGTCA CCATACAGAC AAAAACGACA ACCGTTGATA CCATTCGTCA GCGTTACTGG
ATTGTCGGCG GAAGTCACAA GATTGACATT CTGACCAGAA TCCTTGAAGT TGAGCCGTTT
GATGGCATGC TTATTTTTGT ACGCACGAAA ACCATGACAC TTGAGCTGGC TGAAAAGCTT
CAGGCCAGGG GATATGGCGC GGCAGCTCTT AATGGCGATA TGCCCCAGAA TCAGCGTGAG
CGTACGGTTG ACCAACTGAA GAACGGAGCG TTGAGCATTG TTATTGCCAC CGATGTTGCG
GCGCGAGGCC TTGATGTTGA GCGCATCAGC CATGTGATCA ATTACGATAT TCCTTCCGAT
ACAGAATCCT ATGTGCACCG CATTGGACGA ACCGGTCGTG CAGGTCGCGC CGGTGATGCC
ATTCTGTTTG TCTCTCCGAG AGAGAAAAAT ATGCTCTACT CTATTGAAAG GGCAACACAC
AGTCGTATTG AGCTGATGGA GCTTCCGACG ACAGAGGTTA TCAACAACAA GAGGATAGCA
AAGTTTAACC AGCGGATTAC CGATACCATT GCCGCTGAAG ATCTTGGATT CTTTACCAAG
CTTATCGAGC AGTACTGTCA TGAGCATGAC GTTTCGGCAA TTGAGGCTGC AGCAGCGCTT
GCTTCGATGG TTCAGGGAGA GACACCGCTT CTTTTATCCA ACAAGCCTGA AAAATCGCGT
TCTTATGAAG AGCGGGAAGG ATCAGGCAGG GATCGTGGTT CTGACAGAGA ACGCAGCACA
GACAGAGGCC GCAGTTCTGA CAGGGATCGT GGACCGGTTA AAAAGAGAAC CAAGGGTGAA
ACCTATGGTG ATGAAGGCAA AGAACGCTAT CGTCTTGAAG TTGGCAGTGA GCATGGTGTG
AAAGCGGGCA ATATTCTTGG AGCTATCCTG AATGAAGTTG GTCTTGATCC TGAATCGGTT
GGTCATATTT CAATTAATGA GGGCTACAGC ACGGTTGAAC TGCCCCAGGG TATGCCGGAT
AACGTTTTTC ATGAATTGAG AACAGTCCGG GTTTGTGGTC GTCAATTGCG GTTGAGCAAA
ATGGATGACC AGGAGCGTGA GTCTGCCTAC GCTCCCAAAA AGAGTTTTAA AAAGCCCTTT
AAACCGGCAG GAAAAGAGAC CGCATTCTTT ACCGGTAACA AAAAGAAGCG TAAGGGTTAA
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| Protein sequence | MDFLGLQLAE PLMRALADVG YENPTPIQAQ TIPLILEGRD VLGQAQTGTG KTAAFALPIL
SNIDLEHAEP QALVLAPTRE LAIQVAEAFQ RYAEHLKGFH VVPIYGGQDY GIQLRMLRRG
VHIVVGTPGR VMDHMRRGSL NLASLKCLVL DEADEMLRMG FIDDVEWILD QTPKGRQVAL
FSATMPPVIR RIAQKYLHNP AEVTIQTKTT TVDTIRQRYW IVGGSHKIDI LTRILEVEPF
DGMLIFVRTK TMTLELAEKL QARGYGAAAL NGDMPQNQRE RTVDQLKNGA LSIVIATDVA
ARGLDVERIS HVINYDIPSD TESYVHRIGR TGRAGRAGDA ILFVSPREKN MLYSIERATH
SRIELMELPT TEVINNKRIA KFNQRITDTI AAEDLGFFTK LIEQYCHEHD VSAIEAAAAL
ASMVQGETPL LLSNKPEKSR SYEEREGSGR DRGSDRERST DRGRSSDRDR GPVKKRTKGE
TYGDEGKERY RLEVGSEHGV KAGNILGAIL NEVGLDPESV GHISINEGYS TVELPQGMPD
NVFHELRTVR VCGRQLRLSK MDDQERESAY APKKSFKKPF KPAGKETAFF TGNKKKRKG
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