Gene Ppha_0901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0901 
Symbol 
ID6461013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp938879 
End bp940330 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content59% 
IMG OID642727155 
Producthypothetical protein 
Protein accessionYP_002017805 
Protein GI194336011 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0797032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTCTCG ACTACTCCAC CCTGAACCTT CTCCGTCAGA ACCATCCGGC ATGGCGCCTT 
TTGTGCGCCC AGCATGTGCC GTTGGTGGCC GGGTTTCTGC ACCGGGTCTT TATTGTGCCC
AATGTGCGGA TTCTCTCGCA GGCCGATCTG GTTGAGGCGC TGGAGGATGA GCTGTTCGCC
CTGCGCCAGC AGCTCGGCGC CGACGCACTT CCGGGAACGG CTCAAAATTA CCTGAACGAT
TGGGCCGATA ACGACAAGGG GTGGCTGCGC AAATTCTATC CGGACGGGAC GGATGAGCCT
CACTTTGATC TGACGGCCTC AACCGAAAAG GCGCTGGCCT GGCTGGAGGG GTTGACGGAG
CGGGCATTTG TGGGGACGGA GTCGCGGCTG CTTACCCTGT TTGAACTTTT GCGGCAGATG
AGCACGGGGA GCCAGGCTGA TCCTGAATTG CGGATTGCGG AGCTGCAAAA GCGGCGTGAC
GATATTGATG CCGAAATTGA ACGCATCCGT GCCGGAGAAA TATCGCTGCT CGATGATACC
GGCCTCAAGG ATCGCTTCCA GCAGTTTCTG CAACTGGCCC GTGAGTTGCT GACCGATTTT
CGCGAGGTGG AGCATAACTT TCGCACCCTC GACCGCCGGG TGCGTGAGCG CATTGCCCTC
TGGGAGGGAG CCAAGGGGGC GCTGCTGGAG CAGATCATGG GTGAGCGTGA CGCCATCGCC
GATTCGGATC AGGGGAAAAG TTTTCGCGCA TTCTGGGACT TTCTCATGTC GCAGTCGCGC
CAGGAGGAGC TGAGCCTGCT GCTGGAGGAG GTACTGGCCT TGCCCCCGAT TGTCTCCATG
CGCCCCGACA ACCGTCTGCG GCGTGTTCAC TACGACTGGT TGGAGGCCGG AGAGCATACC
CAGCGCACGG TGGCCCGCCT CTCCGAGCAG TTGCGCCGCT TTCTTGATGA CAAGGCGTGG
CTTGAGAATC GGCGCATCAT GGATATCCTG CACAACATTG AAACCCAGGC TCTTGATGTG
CGTGAAGACA TCATCCCTCC AGGTGCGTTT ATGCCTCTCG ATGGCTCCTC TGCGGCGATC
GAACTGCCCC TCGAAAGAAC GCTCTATCGC ACACCTTTCA AGCCTTTAAT CGCAGGAGTC
GCTCTGGATG AAGGTGATGC AGAGATTGAT ACCGCCGTGC TTTACGCCCA GGTGGTGGTC
GACCGGGCTG AGCTGTTGCG CAATATCCGT CTGGAACTGC AGATGCGCAG CCAGGTCACC
CTTGGAGAGG TGGTTGAGCG TCACCCGCTG CATAACGGAC TGGCCGAACT GGTGGCCTAT
CTGCAACTTG CCGGAGAGTG GCCACGGACG ACGGTGGATG AAGGAGTTGA GGAGCAGGTA
CAATGGCAAA GCTCGACAGG CATAACCCGT AAGGCCACCT TGCCGCGTAT TATTTTATTA
AGAAACGGAT AA
 
Protein sequence
MALDYSTLNL LRQNHPAWRL LCAQHVPLVA GFLHRVFIVP NVRILSQADL VEALEDELFA 
LRQQLGADAL PGTAQNYLND WADNDKGWLR KFYPDGTDEP HFDLTASTEK ALAWLEGLTE
RAFVGTESRL LTLFELLRQM STGSQADPEL RIAELQKRRD DIDAEIERIR AGEISLLDDT
GLKDRFQQFL QLARELLTDF REVEHNFRTL DRRVRERIAL WEGAKGALLE QIMGERDAIA
DSDQGKSFRA FWDFLMSQSR QEELSLLLEE VLALPPIVSM RPDNRLRRVH YDWLEAGEHT
QRTVARLSEQ LRRFLDDKAW LENRRIMDIL HNIETQALDV REDIIPPGAF MPLDGSSAAI
ELPLERTLYR TPFKPLIAGV ALDEGDAEID TAVLYAQVVV DRAELLRNIR LELQMRSQVT
LGEVVERHPL HNGLAELVAY LQLAGEWPRT TVDEGVEEQV QWQSSTGITR KATLPRIILL
RNG