Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0892 |
Symbol | |
ID | 6461034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 931447 |
End bp | 934812 |
Gene Length | 3366 bp |
Protein Length | 1121 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642727146 |
Product | hypothetical protein |
Protein accession | YP_002017796 |
Protein GI | 194336002 |
COG category | [S] Function unknown |
COG ID | [COG4913] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAGT CGCTTGAAAT GGGATTTGTT GCCGATGACC GTCTGGCTGG TTTTCGCCTG CAACGGCTTG AGATATTCAA CTGGGGCACC TTCGATGGCA GGGTCTGGAC GCTCAAACTT GGTGGAAAGA ACGCCCTCCT CACGGGAGAT ATCGGCTCCG GAAAGTCAAC GCTGGTCGAT GCCGTGACTA CCCTGCTGGT GCCAAGCCAG CGCATTGCCT ACAACAAGGC AGCAGGCGCC GACAACCGTG AACGCACCCT GCGCTCATAC GTGCTCGGCT ACTTCAAGTC GGAGCGGCAG GAGAACCTCG GAGGTGGCGC CAAACCGGTC GCCCTGCGCG AACTCAACGG CTATTCAGTC ATTCTCGGTG TCTTTCATAA CGAAGGCTAC GACAAGACCG TCACCCTCGC CCAAATTTTC TGGATGAAGG ATGCCGCACA GCCAGCGCGT CTCTATGCCG CATGTGAACG TGATCTTTCC ATCGCTGCCG ATTTTTCAGC CTTCGGGACT GAAATTTCAA CCCTGCGCAA GCGGCTGCGT GGAGCGGGAG TTGAGCTGTT TGAAAGCTTT CCACCCTACG GTGCCTGGTT CCGGCGACGT TTCGGGATCG AAAATGAACA GGCGCTCGAG CTGTTTCATC AAACCGTCTC GCTCAAGTCG GTGGGAAACC TCACCGATTT CGTCCGTCTC CACATGCTTG AGCCCTTCAC GGTTGAGCCG CGCATTGCCG CCCTTATCCA GCATTTCGAA GATCTCAACC GGGCGCACGA AGCTGTCCTC AAAGCAAAGC GGCAGATAGA GATGCTTGGC CCTCTGGTGG CAGATTGCGA TACGCACCAC ACCATGGCCG AGCGAGCCGA AGAGCTGCGG GCATCGCGCG ACAGCCTTCG CCCCTGGTTC GCCTCCCTCA AACTCGAACT GCTCGAAAAA CGCCATGTCT CGCTGCATGA GGAGCTGAAC CGTCACCAGA TCACCATCGA GCGTCTCGAC GAGGAGCGGC GCACCCTGCA GGGGCGTGAC CGTGAACTGC GCCGAACCAT CGCTGAAAAT GGAGGCGACC GGATTGAAAG TATCGCCGCT GAGATTCGGC AGCATCAGCA GGAGCTTGAA CGGCGCAACC AGAAGGCAAC CCGATATGGA AAACTTGCCA GCCAGCTTGG GGAGCATCCG GCAACGAACG CCGAGGAGTT TTATCAGCAG CGTGCCGGCC ATGCAGCAAT GCACGAAGCA ACTGCCGAAG CTGAAGTGCG GGTGCAAAAC GATCTCAATG AGGCTGGAGT TCTCTTTACC CAGGGACGTC AGGAGCATGA GCTATTGAGT GCAGAGATCA AGAGCCTGAA AGAGCGCATG AGCAATATTG ATGAAAAACA GATTGCCATG CGCCGTTCGC TCTGCAAGGC GCTGAATCTC GCGGAGGTTG AGATGCCCTT TGCCGGCGAG TTGCTTCAGG TTCAGGAGGG AGAGCAGCTC TGGGAAGGAG CCATTGAGCG GGTGCTCCGC AACTTCGGCC TCTCGCTGCT GGTGCCCGAC CATCACTACC CGAAGGTGGC CGAATGGGTA GAACGCACCA ATCTGAAAGG AAGGCTGGTC TATTTTCGGG TGCGTCCACT CTCTCGCAGC GAACAGTTAC CCGATCATCC GGCCTCACTT GCCAGAAAGC TTGCCATCAA AGGCGATTCT CCTTATTTCG ACTGGCTCGA ACGGGAGGTA GCCCATCGTT TCGATCTGGT CTGCTGCATG AGTCAGGAGG AGTTTCGGAG GGAGAAAAAA GCGATCACCC AGGCAGGCCA GATCAAGTCA CCCGGTGAAC GGCACGAAAA GGATGACCGC CACCGCCTCG ACGATCGCAG CCGCTACGTG CTCGGATGGA GCAATGCCGC CAAAATTGCC GTCCTCGAAG AGAAGGGCAA GCAGCAGCAA AACGAGCTGA CCAAACTTGC GGGACACATC AGCACTTTGC AGCAGGAGCA GAAAACGCTC AAGGAGCGCC TGACCATCCT CTCAAGGCTT GGCGAATATC CTGATTTCAG CGATCTCGAC TGGCAGCCAC TCGCCGTTGC CATCGCCCGA CTGGAGAAAG AAAAACGCGA CCTTGAAGCG ACCTCCAATA TCCTGCAAAC CCTGACCGAG CAACTTGCCG CAGTGGAACA AAAGCTGCAT GAGACGGAGC AGCAGCTTGA TGACCGAAAA GATAAACGCT CAAAAATAGA GCAGAAAATC AGCGTCATCA CCGAATTGCA GCAACAGACT GCAGCGCTGC TCGATGAAGC GGGAGGCGAA GCTGCCGCAC GTTTCCCCCT GCTCCAGCTC ATGCGCCAGG AGGCTTTCGG CGACCAGTCG CTGACGGTTG AATCGTGCGA CAATCGCGAA CGGGAGATGC GCGACTGGCT CCAGGCAAAG ATTGACAGCG AAGACCGGAA GCTCTCCCGA TTGGGCGAAA AGATCATCAG GGCGATGACC GAATACAAGG AGGAGTGGAA GCTTGAGACC CGTGAGGTGG ATGTCAACAT TGCTGCAGGG TCGGAGTATC GTTCGATGTT TCAGCAGCTC CAGGCTGACG ATCTGCCGCG CTTTGAGGGA CGGTTCAAAG ATCTGCTCAA CGAAAATACC ATCCGGGAGG TGGCCAATTT TCAGTCGCAA CTGGCCCGCG AACGCGAAAC CATCAAGGAG CGCATTACCC GCCTCAATGA ATCGCTCACG CAAATCGACT TCAATCCGGG ACGATACATC ACCCTCGAAG CACAACTGAA CCTCGATGCC GACATTCGTG ACTTTCAGTC GGAGCTGCGA GCCTGCACCG AAGGGACGCT GACCGGCTCG GATGATGCGC AATACTCCGA AGCCAAATTC CTCCAGGTGC GCCGCATCAT CGACCGCTTC CGTGGCCGTG AAGCCTATGC CGACCTCGAC CGGCGCTGGA CTGCCAAAGT GACCGACGTG CGCAACTGGT TCGTCTTTGC CGCCAGCGAA CGGTGGCGCG AAGATGACAG CGAACATGAA CACTACGCAG ATTCAGGGGG AAAATCGGGA GGACAGAAGG AGAAGCTCGC CTACACCGTC CTTGCCGCCA GCCTTGCCTA CCAGTTCGGC CTCGAATGGG GCGCCGTGCG CTCACGCTCC TTCCGCTTCG TGGTCATTGA CGAGGCTTTC GGACGCGGCT CCGACGAATC GGCCCAGTAC GGACTGCAAC TCTTTGCCCA GCTCAACCTG CAACTGCTCA TCGTCACCCC CTTGCAGAAA ATCCACATCA TCGAGCCCTT CGTCTCCAGT GTCGGCTTTG TGCACAATCA GGAGGGGCGC TGCTCGGTAT TGCGCAACCT CACCATCGAA GAGTATCGCG CCGAAAAAGA GAGGTCGGTG GAATGA
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Protein sequence | MSESLEMGFV ADDRLAGFRL QRLEIFNWGT FDGRVWTLKL GGKNALLTGD IGSGKSTLVD AVTTLLVPSQ RIAYNKAAGA DNRERTLRSY VLGYFKSERQ ENLGGGAKPV ALRELNGYSV ILGVFHNEGY DKTVTLAQIF WMKDAAQPAR LYAACERDLS IAADFSAFGT EISTLRKRLR GAGVELFESF PPYGAWFRRR FGIENEQALE LFHQTVSLKS VGNLTDFVRL HMLEPFTVEP RIAALIQHFE DLNRAHEAVL KAKRQIEMLG PLVADCDTHH TMAERAEELR ASRDSLRPWF ASLKLELLEK RHVSLHEELN RHQITIERLD EERRTLQGRD RELRRTIAEN GGDRIESIAA EIRQHQQELE RRNQKATRYG KLASQLGEHP ATNAEEFYQQ RAGHAAMHEA TAEAEVRVQN DLNEAGVLFT QGRQEHELLS AEIKSLKERM SNIDEKQIAM RRSLCKALNL AEVEMPFAGE LLQVQEGEQL WEGAIERVLR NFGLSLLVPD HHYPKVAEWV ERTNLKGRLV YFRVRPLSRS EQLPDHPASL ARKLAIKGDS PYFDWLEREV AHRFDLVCCM SQEEFRREKK AITQAGQIKS PGERHEKDDR HRLDDRSRYV LGWSNAAKIA VLEEKGKQQQ NELTKLAGHI STLQQEQKTL KERLTILSRL GEYPDFSDLD WQPLAVAIAR LEKEKRDLEA TSNILQTLTE QLAAVEQKLH ETEQQLDDRK DKRSKIEQKI SVITELQQQT AALLDEAGGE AAARFPLLQL MRQEAFGDQS LTVESCDNRE REMRDWLQAK IDSEDRKLSR LGEKIIRAMT EYKEEWKLET REVDVNIAAG SEYRSMFQQL QADDLPRFEG RFKDLLNENT IREVANFQSQ LARERETIKE RITRLNESLT QIDFNPGRYI TLEAQLNLDA DIRDFQSELR ACTEGTLTGS DDAQYSEAKF LQVRRIIDRF RGREAYADLD RRWTAKVTDV RNWFVFAASE RWREDDSEHE HYADSGGKSG GQKEKLAYTV LAASLAYQFG LEWGAVRSRS FRFVVIDEAF GRGSDESAQY GLQLFAQLNL QLLIVTPLQK IHIIEPFVSS VGFVHNQEGR CSVLRNLTIE EYRAEKERSV E
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