Gene Ppha_0881 details

Gene Information

• Locus tag: Ppha_0881
• ID: 6461072
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: +
• Start bp: 922617
• End bp: 923300
• Gene Length: 684 bp
• Protein Length: 227 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 642727136
• Product: protein of unknown function DUF134
• Protein accession: YP_002017786
• Protein GI: 194335992
• COG category: [R] General function prediction only
• COG ID: [COG1342] Predicted DNA-binding proteins

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.451175
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAGAC CCGTAAAATG CAGAAAAATA GGATGCAATC CGGAGTTTCG GCTTTTTGGA 
CCTGCTGAAG TTTCGGCAGT CACGCTCGAA ACAGTTGATC TTTCGTTCGA TGAGTTTGAA 
GCGATCCGGC TTGCAGATTT CGAGGGGTTG TATCAGGATG CTGCGGCTCA ACAGATGCAT 
GTTTCCCGTC AGACGTTTGG CAATATTCTT GCATCGGCCC GCCATAAGGT GAGCCAGATG 
CTGGTTTCAG GAAAAAAGTT AACCGTAACA GGAGGAACTA TCATGGTTAC AAGTGAAGAA 
AGAGTGTTTA AATGTGCAAC CTGCTCTCAT CAATGGAGCG TGGCGCATGG GGTTGAGAGA 
CCGGCGGTCT GCCCGTCATG TGGGAGTGTA AATATTCATC GACTCACATC CGACGGCAGT 
TTTGGCGGTG GACGCAATGG AGCTGGAAAA TGCCGAGGTC TTCGTACCGG GCTGAATCGT 
GAGGGCACGG GTCAGGGAAG CGGCGAGGGA GAAGGCATGG GCCAGGGTTC AGGCGAGGGC 
GAGGTCCATG GTTCTGGCCG AGGATCAGGT CAGGGCCAAG GCCAAGGTAA GGGACAGGGT 
CAAGGCCAGG GTCAGGGCCG GGGATTAGGC CAAAGATGCT GCGATTCTCC AGGGCACGTA 
CATCGCCACG AGGGAGATCA ATAA 

 

Protein sequence

MARPVKCRKI GCNPEFRLFG PAEVSAVTLE TVDLSFDEFE AIRLADFEGL YQDAAAQQMH 
VSRQTFGNIL ASARHKVSQM LVSGKKLTVT GGTIMVTSEE RVFKCATCSH QWSVAHGVER 
PAVCPSCGSV NIHRLTSDGS FGGGRNGAGK CRGLRTGLNR EGTGQGSGEG EGMGQGSGEG 
EVHGSGRGSG QGQGQGKGQG QGQGQGRGLG QRCCDSPGHV HRHEGDQ