Gene Ppha_0871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0871 
Symbol 
ID6461090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp909798 
End bp910793 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content60% 
IMG OID642727126 
ProductBeta-ketoacyl-acyl-carrier-protein synthase I 
Protein accessionYP_002017776 
Protein GI194335982 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCTCA ACTTGCCCCT CAAAATAATC GGACTTGGCC GCTATCTCCC TCCGCGCATC 
GTACCAAACT CCGAGCTTGA AACGATCTGC GCTCTCCCTT CCGGATGGAT AGAGCGCCGC 
AACGGCGTGC GTGAACGACG ATGGGCCACC ACAGAAACCG CCTCCTTCAT GGCCGCAGAG 
GCCGCGCGTG AAGCGCTTGA TGAAGCGAAG CTCAGGCCCG ACCAGCTCAG CCTCATCATC 
AACGCCTCAG GAACCCCCGA ACAGGCCATT CCCGATACCG GCGCACTGAT CCAGCGCCAG 
CTCGGTCTTG GCAAATCAGG AATTCCAGCC ATGAGCGTGC ACACCACCTG CCTCAGCTTC 
ATCACCGCCC TCGACGTAGC CGCAACATAC ATCAATGCCG GGCGCTACAA CCACATCCTC 
ATCGCCAGTT CCGAAATCTC CTCATGCGGA ATAAACCCCA AAGAGCCCGA ATCAGCCACA 
CTGGTAGGGG ATGCCGCTGC TGCTGTTGTT GTCACCCGTG CCACAGAGGG CGACAGCTCC 
TCTCTGCACC ATGCCCATTT CAAAACATGG GGAGAGGGCG CCGCCTTCAC CTCCATCAGA 
GGCGGAGGAT CGGCACGTCA TCCAGCAAAA CCCGGCCACA ACCCCGATGA CGACCTGTTC 
CACATGGATG GACCCGCAGT GCTGCGCATG GTCAGAGGCC TCGATGAACT CTTCCTCGAA 
GAGCTCTATC CCGGCCTCTC AAAAAGCCTC ACAGACATCG ATCTCGTTGT TCCCCACCAG 
TCAAGCAAAG TCGGCCTGCT CCTCCTCCAG CGCTACGGCT GGCCGGAAGC GAAAATCATG 
CGCACACTCC ACCAGCTCGG CAACTGCGTA GCCGCCTCCA TTCCCGCCAC CCTCTACCAG 
AGTGTGCGCG ACGGCAACCT CCAGCGAGGC CAGAAACTCC TCCTCGTCGG CACCGGCGCC 
GGGCTCTCCA TTGGCGGGGT GGTGATGACG TATTGA
 
Protein sequence
MQLNLPLKII GLGRYLPPRI VPNSELETIC ALPSGWIERR NGVRERRWAT TETASFMAAE 
AAREALDEAK LRPDQLSLII NASGTPEQAI PDTGALIQRQ LGLGKSGIPA MSVHTTCLSF 
ITALDVAATY INAGRYNHIL IASSEISSCG INPKEPESAT LVGDAAAAVV VTRATEGDSS 
SLHHAHFKTW GEGAAFTSIR GGGSARHPAK PGHNPDDDLF HMDGPAVLRM VRGLDELFLE 
ELYPGLSKSL TDIDLVVPHQ SSKVGLLLLQ RYGWPEAKIM RTLHQLGNCV AASIPATLYQ 
SVRDGNLQRG QKLLLVGTGA GLSIGGVVMT Y