Gene Ppha_0866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0866 
Symbol 
ID6461103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp905528 
End bp906370 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content48% 
IMG OID642727121 
Productrod shape-determining protein MreC 
Protein accessionYP_002017771 
Protein GI194335977 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGAAGT TTTTTACCCT TCTTTTCAAA TACAATACCT GGCTGCTTTT TGCGGCATAC 
TGCAGTATCG CGGTGATCTT TATTAAACTT CAGCAGGATG ATATACTGGC AAAGATTCAC
ACTGGCAGCA TTGAGTTTGG CGCTGCTATC AATGAAAAGC TGACGGGTAT CAGCTCCTTG
TTTACTCTGA GCAGTGAAAA CGATCGCCTG ATGCAGCTTA ACAGCGATCT GCTCTCGAGG
GTGCTCATCC TTGAAACTGC GGCTGTTGAT GAACGGAACC TCCGGAAAAT TGCTGCCGAC
AGCAGCTTCA ATGCTTCAGG GTTTCTTATG GCAAGGGTTG TTGACCGCAA ATTCAGTGAC
CGTGACAATA TGCTGGTGAT TGATGCCGGA TGGAGACGGG GAATAAAAAA AGATATGACC
GTTCTGGTGC CACAGGGTCT GGTGGGGAGA GTCATCTCTG TTTCGGAAAA CTATGCAAGG
GTGATGCCGG TTATCCATCC GGATTTCAAG GTCTGCGTGG TAGCCGATTC ATCGAACAAC
ATGGGTATTC TCTCCTGGAG CGGAGGCAAA GAGTTCATCG CCCAGGTGGA ACACATTCCC
ATCAGCAGCA CGCTTAAAGT GCATGAACGC ATAGTCACTT CCGATTTCAG TACCTTTTCA
ATACGGGGTA TTCCTGTCGG AAGAGTGGTT CGCATAACAC CTGATAACCT CTTTTACAGG
GTTGATGTAC GGCTTGCTGT GGATTTTGCG TCACTTACCC ACGTACTGGT TGCTCCGCTG
AAAATAGAAC CGGAAAAGAG CGCGATTACC GGCAATACTC CGGAAAAACA AGAGATCCCT
TAA
 
Protein sequence
MRKFFTLLFK YNTWLLFAAY CSIAVIFIKL QQDDILAKIH TGSIEFGAAI NEKLTGISSL 
FTLSSENDRL MQLNSDLLSR VLILETAAVD ERNLRKIAAD SSFNASGFLM ARVVDRKFSD
RDNMLVIDAG WRRGIKKDMT VLVPQGLVGR VISVSENYAR VMPVIHPDFK VCVVADSSNN
MGILSWSGGK EFIAQVEHIP ISSTLKVHER IVTSDFSTFS IRGIPVGRVV RITPDNLFYR
VDVRLAVDFA SLTHVLVAPL KIEPEKSAIT GNTPEKQEIP