Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0864 |
Symbol | |
ID | 6461108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 903089 |
End bp | 905014 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642727119 |
Product | penicillin-binding protein 2 |
Protein accession | YP_002017769 |
Protein GI | 194335975 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAC CCCAGCAAAG CGCCAGAACC GTCTCTTTTT TTGTGATTGC AGTTTTTACG GTACTGTTTG GCCGACTCTT CTATCTGCAG GTGCTTAATT ATCAGCAGCT TGGATCAATT TCAACAACAA ACAGCATCCG AAGAATCTGG ATGCCGCCTC CGAGAGGACG GATGATTGAC CGGAACGGGA TTATCATTGT CGACAATCAG CCTCTCTATA CAATCAAGAT TATTCCTTCT GAATTCAGGA AAGAAAAAAC TGCTTTTCTT GCGAGGCTGA TACAGAAGCC AAAGGAGGAG CTGGATGAAA GTTACCGCAA GGGATATGCG TTTAACCGAT TTTCAGCAAC CATTGTAAAC CGTAACCTTG ATGCCATTGC AATAGCGAGA GTCAGCGAGA ATCTCTGGCA GCTTCCCGGT GTCCTTATAG AGTCCGACAA CAAACGACTC TATCCTGACG CCCTTTTTGG AACCCATCTC TTTGGCTATT TACGCTCGAT ATCGAGGGAA AAGCTTGATG AGCTGGCCGA CCAGGGTTAC TCTCAGGATG ACAAAATCGG TTTCAGCGGA CTGGAAAAAT TTTATGAGGA GCGGCTGAAA GGTCAGAAAG GGGCCCGGTT TGAAATGGTT ACCCCTTTGG GGAAATATGC GGGAAAATAC GATGACGGAA AGAGCGATAT CGTCTCCATA AAGGGGGATG ATCTCTATCT GGCTATTGAC GGTGGACTGC AGCAACTTGC TGAACAATTG CTGAGAAAAA CGGGAAAATC AGGGGCTGTC GTGGCTATTG ACCCCTCAAC CGGCGGAGTC CTTGCCCTTG CCAGCGCACC GGACTATGAT CTTGATATCT TCAACGGTTC TACTGATCGC AAAGGATGGA ACAGTATTCT TACCAATCCG TCAAAACCGC TTTTTAACCG CACCGTTCAG GCTGTTTATC CGCCAGGATC CATTTACAAG ATGATTCTTG CGATGGCAGC GCTTGAGGAA AAGAGATTTG ATCCGAAGAA GAAGATACTC GATAACGGGG TCTTCATCTA TGGAAAACGA CGATTTCTCA GCAATGAGGG TAGGGGGCAC GGATGGGTGG ATATGAGAGA GGCCATTACG GTTTCATCCA ATGTCTATTT TTATAACCTG ATTTTTCCTG TGGGGTTTGA GAACTGGACA AAATATGGCG CCATGTTCGG TTTTGGACAA AAAAGCGGTA TTGACCTGCC TGGCGAGAGG GCCGGACTTC TTCCATCAAC CAGTTACTAC AATAAACGGT ATGGCGAGAA CAGGTGGACA AAGGGCTATC TGGTCAGCCT TGCGATTGGC CAGGGTGAGC TTGGCACGAC ACCGGTGCAG CTTGCTGCCT ATGCTGCGGC CATTGCCAAC AATGGCACAC TCTATCAGCC TCATCTTGTT AAAGGATATC GCGATACGGC TACGGGTAAA TATTTTCCCT TCCTCTATAC AAAACAGGAG CTTCCGGTTT CAGCAGAAAC ATTCGCTCTT ATCAAGGATG GTATGATCGG GGTTGTACGA CGGGGTACAG GCACGCTGGC CCAGGTACCT GGTGTAACTG TTGCAGGAAA AACCGGAACT GCACAAAATC CCCATGGGAA GGATCATGCG TGGTTTATTG CTTTTGCTCC GGTGGAGAAT CCAAAAATCG CCATGGCGGT GCTTGTGGAG AATGCTGGTT TCGGTGGCGC CATTTCGGCT CCGATTGCCC GTGAACTGAT CCGCTACTAT GTGAAGGGTG AGAAGGTGGC TGTTGCACCG GAAAGAAAAG GAAACGCACC CGCTGATAGT GTGCTGCAAG CTGATAGTAC GGATACAGCG ATACCGGCAG CAGTGCAACC GGAAAAGGTC ATCAATAACG CTGAACCTGT TACCGGTGAA CGTATTGACA ACAAGAGTGG AGAGGTGAGC GAATGA
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Protein sequence | MDKPQQSART VSFFVIAVFT VLFGRLFYLQ VLNYQQLGSI STTNSIRRIW MPPPRGRMID RNGIIIVDNQ PLYTIKIIPS EFRKEKTAFL ARLIQKPKEE LDESYRKGYA FNRFSATIVN RNLDAIAIAR VSENLWQLPG VLIESDNKRL YPDALFGTHL FGYLRSISRE KLDELADQGY SQDDKIGFSG LEKFYEERLK GQKGARFEMV TPLGKYAGKY DDGKSDIVSI KGDDLYLAID GGLQQLAEQL LRKTGKSGAV VAIDPSTGGV LALASAPDYD LDIFNGSTDR KGWNSILTNP SKPLFNRTVQ AVYPPGSIYK MILAMAALEE KRFDPKKKIL DNGVFIYGKR RFLSNEGRGH GWVDMREAIT VSSNVYFYNL IFPVGFENWT KYGAMFGFGQ KSGIDLPGER AGLLPSTSYY NKRYGENRWT KGYLVSLAIG QGELGTTPVQ LAAYAAAIAN NGTLYQPHLV KGYRDTATGK YFPFLYTKQE LPVSAETFAL IKDGMIGVVR RGTGTLAQVP GVTVAGKTGT AQNPHGKDHA WFIAFAPVEN PKIAMAVLVE NAGFGGAISA PIARELIRYY VKGEKVAVAP ERKGNAPADS VLQADSTDTA IPAAVQPEKV INNAEPVTGE RIDNKSGEVS E
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