Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0847 |
Symbol | |
ID | 6461158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 882672 |
End bp | 883817 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642727098 |
Product | glycosyl transferase group 1 |
Protein accession | YP_002017752 |
Protein GI | 194335958 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00663707 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAAA TGAAAATCGG TATTTCGTGT CACCATACTT ACGGGGGGAG CGGGGCAATT GCCGCAGAGC TGGGCAAGGC GCTTGCTGCC AGAGGGCATA TTGTTCATTT TTTCAGCAAG TCAGCTCCTT TTCGGCTCGG AGCTTTTTCG CGAAATATTT TCTGCCATGA GATTGAAGTG ATGCACTATC CGCTTTTTGA GTCACCCTTT TACTCTCTCG CCCTTGCCTC GAAAATTGCC GATATCGCCT ATTATGAAAA ACTTGACATT GTTCATGCTC ACTATGCGAT TCCCCACGCC TTGAGCGCCA TGCTTGCACG CCAGATGATT GAGGACAAAT GTTCCGAATT GAAGTGTTTC AAGCTGGTAA CCACGCTGCA TGGTACCGAT ATCACCGTCG TGGGTGCCGA CCGGGGGATG CAGGATGTTG TGAGGCTCGC TATTAACAAA TCTGACGGGG TGACGACCGT GTCCGCCTGG CTGAAGGATG AGACGGTCAG GATGTTCAGC CCAAAAAAGG AGATTACGGT CATTCCTAAT TTTGTTGATA CGTCACTCTT TTTTCGCTCT CCGAAACCGG AAATTCGTGA ACAACTTGGC CTTGGGCAGG AAAAAATTGT TATTCACATC TCCAATTTCA GGCCGGTAAA ATGTATTGGC GATATTATCC GGATTTTTTA TGCTTTAAGT AAACGCGTTG ATGCAACGCT GCTGCTCGTG GGTGATGGTC CGGAACGCAG CGATGCTGAA ATCCAGGTTC GCCAGTTGGG AATAGTGGAT CGGGTACGGT TTCTCGGCAA GCTGGATGAT ATTGTTCCAC TGCTCTCTAT CGCTGACCTC ATGTTGATGC CGAGCAATGT TGAGTCATTC GGCCTTGCCG CGCTTGAAGC CATGGCCTGT GGTGTCCCGG TCGTGGCAAC CATGGCGGGA GGTTTTCCCG AATTTATTGT TCCTGGGGTT CATGGTTATC TGCTTGCTCC GGGAGATATC AACGGCATGA TGGAGAAGGC GCTTCTTCTG CTTTCAGATC CCGGCCACTG GTTAGAGTGT TCCCAGGCAT GTGTCCTCCA GGCAAAGCGG TATGAGACCG CCTTGCTTGT TGAACAGTAT GAAGCATATT ATACGATGCT TCTCGCAGAG GCATAG
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Protein sequence | MQKMKIGISC HHTYGGSGAI AAELGKALAA RGHIVHFFSK SAPFRLGAFS RNIFCHEIEV MHYPLFESPF YSLALASKIA DIAYYEKLDI VHAHYAIPHA LSAMLARQMI EDKCSELKCF KLVTTLHGTD ITVVGADRGM QDVVRLAINK SDGVTTVSAW LKDETVRMFS PKKEITVIPN FVDTSLFFRS PKPEIREQLG LGQEKIVIHI SNFRPVKCIG DIIRIFYALS KRVDATLLLV GDGPERSDAE IQVRQLGIVD RVRFLGKLDD IVPLLSIADL MLMPSNVESF GLAALEAMAC GVPVVATMAG GFPEFIVPGV HGYLLAPGDI NGMMEKALLL LSDPGHWLEC SQACVLQAKR YETALLVEQY EAYYTMLLAE A
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